DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerT and SLC6A13

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_057699.2 Gene:SLC6A13 / 6540 HGNCID:11046 Length:602 Species:Homo sapiens


Alignment Length:599 Identity:248/599 - (41%)
Similarity:364/599 - (60%) Gaps:35/599 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TTPAKVTDPLAPKLANNERILVVSVTERTRET--WGQKAEFLLAVIGFAVDLGNVWRFPYICYQN 107
            ||....|.|:.|.:...|.       :.|.|.  |..|.||:|:|.|..:.|||||||||:||:|
Human     8 TTSNGETKPVYPVMEKKEE-------DGTLERGHWNNKMEFVLSVAGEIIGLGNVWRFPYLCYKN 65

  Fly   108 GGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYN 172
            |||||.:||.:||...|:|:|.:|.||||:...|.::.|::|||..:|:|||..:|.|.:.:||.
Human    66 GGGAFFIPYLVFLFTCGIPVFLLETALGQYTSQGGVTAWRKICPIFEGIGYASQMIVILLNVYYI 130

  Fly   173 TIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQV---------TSENFTELATSPAKEFFERKV 228
            .::.||::|||:|||..|||..|.:.||||:||:.         ||||    ||||..||:||:|
Human   131 IVLAWALFYLFSSFTIDLPWGGCYHEWNTEHCMEFQKTNGSLNGTSEN----ATSPVIEFWERRV 191

  Fly   229 LESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVS 293
            |:.  .:|:..:|.::..||||:...:|:.||.:||||:|.||||:.||..||::|::||:|||:
Human   192 LKI--SDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVT 254

  Fly   294 LPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSS 358
            ||||.:||::||.|...:|.:.:||:||.:|||||.....|.|.||.||||::||||||.:....
Human   255 LPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCIALCF 319

  Fly   359 INCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLI 423
            :|..|||:|||.|||:||:|:..|...|.:|...||||.||.||.|:..:..|..|:..||.|::
Human   320 LNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPRAVVMLPFSPLWACCFFFMVV 384

  Fly   424 TLGLDSTFGGLEAMITALCDEYPRVIGR--RRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVY 486
            .|||||.|..:|:::|||.|.||.|..:  |||:.:|.:....||..|..:|.||:.:....:.|
Human   385 LLGLDSQFVCVESLVTALVDMYPHVFRKKNRREVLILGVSVVSFLVGLIMLTEGGMYVFQLFDYY 449

  Fly   487 -GPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMG 550
             ..|:.:|||...|:..|.|.||..||..::|.|:|.:|....:.||.:::|......|:||::.
Human   450 AASGMCLLFVAIFESLCVAWVYGAKRFYDNIEDMIGYRPWPLIKYCWLFLTPAVCTATFLFSLIK 514

  Fly   551 YKEM-LGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQESFQPEDN----- 609
            |..: ..::|.||.|...:||.:..||::|||.:.:|: ....||..|:|:::...|.::     
Human   515 YTPLTYNKKYTYPWWGDALGWLLALSSMVCIPAWSLYR-LGTLKGPFRERIRQLMCPAEDLPQRN 578

  Fly   610 -CGSVVPGQQGTSV 622
             .|...|....||:
Human   579 PAGPSAPATPRTSL 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 236/547 (43%)
SLC6A13NP_057699.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 5/13 (38%)
SLC6sbd_GAT2 32..575 CDD:271396 236/549 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53371
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.830

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