DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and SLC6A8

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_005620.1 Gene:SLC6A8 / 6535 HGNCID:11055 Length:635 Species:Homo sapiens


Alignment Length:598 Identity:261/598 - (43%)
Similarity:361/598 - (60%) Gaps:33/598 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DDKESPNNEDDSNEDDGDHTTPAKVTDPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGF 90
            |:|:.|...      .|....|||...|:.  |......|.|.    .||||.::.:|:::.:||
Human    16 DEKKGPLIA------PGPDGAPAKGDGPVG--LGTPGGRLAVP----PRETWTRQMDFIMSCVGF 68

  Fly    91 AVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKG 155
            ||.|||||||||:||:||||.||:||.|..:.||:|:|::|::||||.:.|.:::| .|||..||
Human    69 AVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFMKAGSINVW-NICPLFKG 132

  Fly   156 VGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQV---------TSEN 211
            :|||..:|..|...||..::.|..|||..|||:.|||.:|.:.|||.:|:::         :..|
Human   133 LGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPDCVEIFRHEDCANASLAN 197

  Fly   212 FT--ELA--TSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKV 272
            .|  :||  .||..||:|.|||.  ...||:..|.:...:.||:...:|||||.:||||:|.||:
Human   198 LTCDQLADRRSPVIEFWENKVLR--LSGGLEVPGALNWEVTLCLLACWVLVYFCVWKGVKSTGKI 260

  Fly   273 VWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLL 337
            |:.||..|||||::||||||.||||.:||.|||.|:|.||.:.:|||||.:|||||...|.|.|.
Human   261 VYFTATFPYVVLVVLLVRGVLLPGALDGIIYYLKPDWSKLGSPQVWIDAGTQIFFSYAIGLGALT 325

  Fly   338 ALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYP 402
            ||.|||:||||||:||:|.:.||..|||.||||:||:||:||..|...|.||...||||.||.||
Human   326 ALGSYNRFNNNCYKDAIILALINSGTSFFAGFVVFSILGFMAAEQGVHISKVAESGPGLAFIAYP 390

  Fly   403 EAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRR--RELFVLLLLAFIF 465
            .|:..|..:..|:.:||.||:.|||||.|.|:|..||.|.|..|.....|  ||:.|.|..|..|
Human   391 RAVTLMPVAPLWAALFFFMLLLLGLDSQFVGVEGFITGLLDLLPASYYFRFQREISVALCCALCF 455

  Fly   466 LCALPTMTYGGVVLVNFLNVY-GPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWR 529
            :..|..:|.||:.:....:.| ..|..:|:..|.|...|.|.||.|||..|:..|:|.:|..:.:
Human   456 VIDLSMVTDGGMYVFQLFDYYSASGTTLLWQAFWECVVVAWVYGADRFMDDIACMIGYRPCPWMK 520

  Fly   530 ICWTYISPVFLLTIFIFSIMGYKEML-GEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASK 593
            .||::.:|:..:.||||:::.|:.:: ...|.||.|...:|||...||:||:|:::: .....:|
Human   521 WCWSFFTPLVCMGIFIFNVVYYEPLVYNNTYVYPWWGEAMGWAFALSSMLCVPLHLL-GCLLRAK 584

  Fly   594 GGCRQRLQESFQP 606
            |...:|.|...||
Human   585 GTMAERWQHLTQP 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 250/550 (45%)
SLC6A8NP_005620.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 4/17 (24%)
SLC6sbd_CT1 52..621 CDD:271397 250/550 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53371
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.830

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