DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and SLC6A2

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001165975.1 Gene:SLC6A2 / 6530 HGNCID:11048 Length:628 Species:Homo sapiens


Alignment Length:587 Identity:304/587 - (51%)
Similarity:422/587 - (71%) Gaps:20/587 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EDDGDHTTP------AKVTDPLAPKLANNERILVV--SVTERTRETWGQKAEFLLAVIGFAVDLG 95
            |::|..|.|      .|..:.|..|..|..:.|:.  ....:.|||||:|.:|||:|:||||||.
Human    13 ENNGADTGPEQPLRARKTAELLVVKERNGVQCLLAPRDGDAQPRETWGKKIDFLLSVVGFAVDLA 77

  Fly    96 NVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAI 160
            |||||||:||:|||||||:||.||||..|:|||||||||||::|.|..::|| |||..||||||:
Human    78 NVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWK-ICPFFKGVGYAV 141

  Fly   161 CLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQVTSEN---------FTELA 216
            .||.:|:|.|||.||.|::||||:|||..||||.|.:.||:.||......|         :::..
Human   142 ILIALYVGFYYNVIIAWSLYYLFSSFTLNLPWTDCGHTWNSPNCTDPKLLNGSVLGNHTKYSKYK 206

  Fly   217 TSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPY 281
            .:||.||:||.||..::.:|:..:|..:..|.||:..|.:::||||||||:::|||||:||..||
Human   207 FTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCLMVVVIVLYFSLWKGVKTSGKVVWITATLPY 271

  Fly   282 VVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFN 346
            .||.:|||.||:||||..||..||..::::||.:.||||||:|||||||.|||.|:|.:|||||:
Human   272 FVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEATVWIDAATQIFFSLGAGFGVLIAFASYNKFD 336

  Fly   347 NNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAIATMSGS 411
            ||||||||:||||||:|||::||.|||:|||||:..|.:|:.|..||.|||||:|||||:|:|||
Human   337 NNCYRDALLTSSINCITSFVSGFAIFSILGYMAHEHKVNIEDVATEGAGLVFILYPEAISTLSGS 401

  Fly   412 VFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALPTMTYGG 476
            .||:::||:||:.|||||:.||:||:||.|.|:: :|:.|.|:||...:....||.||..:|.||
Human   402 TFWAVVFFVMLLALGLDSSMGGMEAVITGLADDF-QVLKRHRKLFTFGVTFSTFLLALFCITKGG 465

  Fly   477 VVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLL 541
            :.::..|:.:..|.:|||.|.:||.||.|||||||||:|::||:|.:|||:||:||.::||.|||
Human   466 IYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSNDIQQMMGFRPGLYWRLCWKFVSPAFLL 530

  Fly   542 TIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQESFQP 606
            .:.:.||:.:|.:..::|.:|.|:..|||.:..||::.:|:|:||| |.:::|...:||.....|
Human   531 FVVVVSIINFKPLTYDDYIFPPWANWVGWGIALSSMVLVPIYVIYK-FLSTQGSLWERLAYGITP 594

  Fly   607 ED 608
            |:
Human   595 EN 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 293/541 (54%)
SLC6A2NP_001165975.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/9 (44%)
SLC6sbd_NET 56..612 CDD:212081 295/544 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53371
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000975
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101590
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X639
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.730

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