DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and Slc6a14

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_064433.3 Gene:Slc6a14 / 56774 MGIID:1890216 Length:638 Species:Mus musculus


Alignment Length:607 Identity:248/607 - (40%)
Similarity:363/607 - (59%) Gaps:48/607 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KVTDPLAPKLANNERILVVSVTE-RTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAF 112
            |||       |::|...|....| :.|..|.:|:::||:::|:||.|||||||||:.|.||||||
Mouse    17 KVT-------ASSENFHVGENDENQERGNWSKKSDYLLSMVGYAVGLGNVWRFPYLTYTNGGGAF 74

  Fly   113 LVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGW 177
            |:||.:.|...|||||::|.:||||...|.:|:| ||.|..:|||..:.||.:::.:|||.||.:
Mouse    75 LIPYAIMLALAGLPLFFLECSLGQFASLGPVSVW-RILPLFQGVGITMVLISVFVAIYYNVIIAY 138

  Fly   178 AVYYLFASFTSKLPWTSCDNPWNTENCMQ----------------------VTSENFTELATS-- 218
            ::|||||||.|.|||.:|.: |..|||.:                      |.:.|.|.|..|  
Mouse   139 SLYYLFASFQSVLPWANCSS-WADENCSRTPIVTGCNVSIGAGEMFMNISWVNTNNLTCLNGSEV 202

  Fly   219 ------PAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTA 277
                  |:::::::..|:  :.:|:|..|.|...||||:...:::|..:|:||::|:||||:.||
Mouse   203 FRPGQLPSEQYWDKVTLQ--RSSGMDETGVVVWYLALCLLLAWLIVGAALFKGIKSSGKVVYFTA 265

  Fly   278 LAPYVVLIILLVRGVSLPGADEGIKYYLTPE--WHKLKNSKVWIDAASQIFFSLGPGFGTLLALS 340
            |.|||||:|||:||.:|.||.:||.||:..:  :.||:.::||.|||:|||:||...:|.|:|||
Mouse   266 LFPYVVLLILLIRGATLEGASKGISYYIGAQSNFTKLREAEVWKDAATQIFYSLSVAWGGLVALS 330

  Fly   341 SYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAI 405
            ||||||||||.||:|....|||||..|||.|||:||:||::....:.:|...|..|.||.||||:
Mouse   331 SYNKFNNNCYSDAIIVCLTNCLTSVFAGFAIFSILGHMAHISGKEVSQVVKSGFDLAFIAYPEAL 395

  Fly   406 ATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALP 470
            |.:....||||:||.||:||||||.|..:|.:.|...|.:|:.:.|.|....|.....:||..|.
Mouse   396 AQLPAGPFWSILFFFMLLTLGLDSQFASIETITTTFQDLFPKAMKRMRVPITLGCCLILFLLGLL 460

  Fly   471 TMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLF---WRICW 532
            .:|..|:..|:.::.:..|..||....:|.||:.|.||.:||..|:|.|:|:|..:|   ||.||
Mouse   461 CVTQAGIYWVHLIDHFCAGWGILIAAILEIAGIIWIYGGNRFIEDIEMMIGAKRWIFWLWWRACW 525

  Fly   533 TYISPVFLLTIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCR 597
            ..|:|:.|..|.::|::.:......:..||||...:||.:....::.||:..|.|...| :|...
Mouse   526 FVITPILLSAILVWSLVKFHRPDYADIPYPDWGVALGWCMIIFCIIWIPIMAIIKIVQA-EGNIL 589

  Fly   598 QRLQESFQPEDNCGSVVPGQQG 619
            ||:....:|..|.|..:...:|
Mouse   590 QRIISCCRPASNWGPYLEKHRG 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 237/567 (42%)
Slc6a14NP_064433.3 SLC5-6-like_sbd 36..637 CDD:294310 241/581 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 618..638
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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