DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a2

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_009301625.1 Gene:slc6a2 / 565776 ZFINID:ZDB-GENE-110408-4 Length:625 Species:Danio rerio


Alignment Length:607 Identity:306/607 - (50%)
Similarity:417/607 - (68%) Gaps:36/607 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EDDG-DHTTPAKVTDPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPY 102
            |.:| .:|..:.|..|      ::......|..|..|||||:|.:|||:||||||||.|||||||
Zfish    34 EQNGVQYTNSSVVASP------SSRACTSASGEEIERETWGKKMDFLLSVIGFAVDLANVWRFPY 92

  Fly   103 ICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYM 167
            :||:|||||||:||.|||...|:|||||||||||::|.|..::|| |||..|||||.:.:|.:|:
Zfish    93 LCYKNGGGAFLIPYVLFLFIAGMPLFYMELALGQYNREGAATLWK-ICPVFKGVGYTVIVIALYV 156

  Fly   168 GMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQVTSENFTELA---------TSPAKEF 223
            |.|||.||.|::|||:||.||:|||..|:||||:.||.:....|.|.|.         .:||.||
Zfish   157 GFYYNVIIAWSLYYLYASLTSELPWLHCNNPWNSPNCTEPKDINGTVLGNGTSYAKYKNTPAAEF 221

  Fly   224 FERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILL 288
            :||.||.|::..|:..:|..:..|.:|:..|..::||||||||:|:||||::||..||:||::||
Zfish   222 YERGVLHSHESKGIGDLGLPRWELTICLVVVAFILYFSLWKGVKSSGKVVYITATMPYIVLLVLL 286

  Fly   289 VRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDA 353
            :||::||||..||:.||..:..||.|.:||||||:|||||||.|||.|:|.||||||||||||||
Zfish   287 IRGITLPGAMNGIRAYLHIDLKKLNNPQVWIDAATQIFFSLGAGFGVLIAFSSYNKFNNNCYRDA 351

  Fly   354 LITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAIATMSGSVFWSIIF 418
            ::||:|||:|||.:||.|||||||||...|.:|..|..||.||||::|||||:|:.|:.|::|:|
Zfish   352 ILTSTINCVTSFFSGFAIFSVLGYMAEQHKVNIKDVATEGAGLVFVIYPEAISTLPGATFFAIVF 416

  Fly   419 FLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFL 483
            |:||:|||:||:.||:||::|.|.|:: :::.|.|:||....:...||.||..:|.||:.::..|
Zfish   417 FIMLLTLGIDSSMGGMEAVLTGLSDDF-KILKRNRKLFTFATVVGTFLMALLCVTNGGIYVLTLL 480

  Fly   484 NVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSI 548
            :.|..|.:|||.|..||.||.|||||||||.|:|:|:|.|||::||:||.::||.|||.:.|.||
Zfish   481 DKYAAGTSILFGVLFEAIGVSWFYGVDRFSEDIERMMGFKPGIYWRLCWKFVSPAFLLLVVIASI 545

  Fly   549 MGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQESFQPEDNCGSV 613
            :....:..:||.:|.|:..:||::..||:|.:|.|.||| ||:.....::||.....||      
Zfish   546 VTSGRLTYDEYVFPYWADMLGWSIALSSMLFVPFYAIYK-FFSVPSSFKERLAYCVTPE------ 603

  Fly   614 VPGQQGTSVXHDHAQV-HVNIR 634
                      |:|..| ..|:|
Zfish   604 ----------HEHHLVAEGNVR 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 292/541 (54%)
slc6a2XP_009301625.1 SLC5-6-like_sbd 64..623 CDD:294310 299/571 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53371
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000975
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101590
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X639
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.830

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