DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a7

DIOPT Version :10

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001074049.1 Gene:slc6a7 / 562050 ZFINID:ZDB-GENE-070112-1492 Length:537 Species:Danio rerio


Alignment Length:581 Identity:217/581 - (37%)
Similarity:321/581 - (55%) Gaps:65/581 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFA 184
            |.|.|:|||.|||:|||:...|.:::|| .||.|||:|..:..:...:.:|||.||.|..|||.:
Zfish     2 LFFTGMPLFLMELSLGQYGAAGPITVWK-CCPLLKGIGIGMLCVSTLVCLYYNVIIAWTFYYLGS 65

  Fly   185 SFTSKLPWTSCDNPWNTENCMQVTSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLAL 249
            ||.|.||| |||...|...|     .|.|....||::.|:..|||......||...|||:..|||
Zfish    66 SFQSPLPW-SCDALQNIALC-----ANKTNSTQSPSEVFWNEKVLGVVHSTGLSDPGPVRWPLAL 124

  Fly   250 CVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKN 314
            |:...:::::..:.||:.|:||||::||..||.||::|::||.:|.|:.:|:.:||||:|.:|.:
Zfish   125 CLLAAWIIIFLCMLKGIHSSGKVVYLTATFPYFVLLVLIIRGATLEGSLDGVAFYLTPKWDQLAD 189

  Fly   315 SKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMA 379
            ::||.|||||||:|||.|.|.||:::|||||:||..||.:|.:..||.|||.|||.|||:||:||
Zfish   190 AQVWNDAASQIFYSLGIGVGGLLSMASYNKFDNNVIRDTIIITIGNCSTSFFAGFAIFSILGHMA 254

  Fly   380 YVQKTSIDKVGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDE 444
            :.:...:|||...||||.|:.||||:|.:.|||||||:|||||..||:|:.||.:|.:.||:.||
Zfish   255 FKKGVPVDKVADSGPGLAFVAYPEALALLPGSVFWSILFFLMLFMLGVDTLFGNMEGICTAVLDE 319

  Fly   445 YPRVIG--RRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFY 507
            :|::..  :.:.||:.:|....:|..|..:|.||:.....::.:.....::.:......|:.:||
Zfish   320 FPQLRSNLKHKTLFLAVLCFSFYLMGLLLITDGGIYWFTLIDSFSTSFGLIIITLFMCIGISFFY 384

  Fly   508 GVDRFSSDVEQMLGSKPG------LFWRICWTYISPVFLLTI---FIFSIMGYKEMLGEEYYYPD 563
            ||::|..|:..|:...|.      |:::.||...:| ||||.   :||..|....:....|.||.
Zfish   385 GVNQFCQDIVDMICRCPPWCTKMLLYFKACWVVFTP-FLLTFILTYIFIEMYRTSLRYGSYVYPI 448

  Fly   564 WSYQVGWAVTCSSVLCIPMYIIYKFFFASK--GGCRQRLQESFQPEDNCGSVVPGQQGTSVXHDH 626
            |...:|   .|...||....:|:.....||  |..:.|.::|.:|                    
Zfish   449 WGKALG---VCMGALCCLQILIWAIVAISKESGTLKDRFKKSIRP-------------------- 490

  Fly   627 AQVHVNIRTSCTSIKIYNLNCSSNSNSLSPTTSGAEGRSCYSTNLNCNHSCPSEDQYRSRN 687
                      ..|.::.|:|.||....:.|.|  .||.  ::.||       :|..|...|
Zfish   491 ----------LNSWRVNNINSSSQEQHVEPHT--IEGP--FTVNL-------TEADYTGMN 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 202/499 (40%)
slc6a7NP_001074049.1 SLC5-6-like_sbd 1..495 CDD:444915 204/533 (38%)

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