DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a19a.1

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001091648.1 Gene:slc6a19a.1 / 553256 ZFINID:ZDB-GENE-070620-2 Length:629 Species:Danio rerio


Alignment Length:626 Identity:206/626 - (32%)
Similarity:313/626 - (50%) Gaps:102/626 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFL 120
            |..:..|::.:....||.:  |..||:::|..:||.|.|||||||||:|..:|||||::|:.:.|
Zfish    15 PSHSELEKLELQEAGERPK--WDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILL 77

  Fly   121 IFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFAS 185
            :..|:||.::|.|:||..|.|.:.:|:.|.|.|.|||.|..|....:|||||||:.|.::|||.|
Zfish    78 VLEGVPLLHLEFAIGQRLRSGSVGVWRSISPYLTGVGIASMLASFIVGMYYNTIMAWVMWYLFNS 142

  Fly   186 FTSKLPWTSCDNPWNTENCMQVTSENFTELA-----TSPAKEFFERKVLESYKGNGLDFMGPVKP 245
            ....|||:.|  |.|.         |.|.|.     :||...|:.|:.|.:  ...::..|.::.
Zfish   143 LQEPLPWSQC--PVNL---------NRTGLVSECERSSPVDYFWYRETLNT--STAIEDSGALQW 194

  Fly   246 TLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWH 310
            .|.||:...:..:|....:|:.:.||.|::|:..|||||.|.|:|.::|.|:..|||:..||:.:
Zfish   195 WLVLCLLCAWTFLYICCIRGIETTGKAVYITSTLPYVVLTIFLIRALTLKGSVNGIKFLFTPDVN 259

  Fly   311 KLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVL 375
            :|.|...|:||.:|:.||....||.|::.||||..:|||.:||:..|.||.|||..:..||:|::
Zfish   260 ELMNPSTWLDAGAQVLFSFSLAFGGLISFSSYNSVHNNCEQDAVTISIINGLTSVYSATVIYSII 324

  Fly   376 G---------------------------------YMAYVQKTSIDK------------------- 388
            |                                 |...:|:.:|.:                   
Zfish   325 GFRATENYDICLDSNILSLLNAFDLPEGSITENNYTVALQQLNISRPDIIQELQLKTCDMQTLLS 389

  Fly   389 VGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCD------EYPR 447
            .|:||.||.|||:.|||..|..|..||::||:||..|||.:.||.:|.::..|.|      .:| 
Zfish   390 EGVEGTGLAFIVFTEAITKMPVSPLWSVLFFIMLFCLGLSTMFGNIEGVVVPLQDLNLLPKRWP- 453

  Fly   448 VIGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRF 512
                 :|:|..|.....||.||..:...|...:...:.:...:.:|.:...|...|.:.||:|||
Zfish   454 -----KEVFTGLTCVVSFLTALVFVQSSGNYWLALFDGFAGSIPLLVIALCELIAVVYVYGIDRF 513

  Fly   513 SSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIF-SIMGYKEMLG--------------EEYYYP 562
            :.|::.|:|.||.:||:|.|.::|||.||.|.|| .|....:.|.              :|..||
Zfish   514 NEDIKFMVGHKPNIFWQISWRFLSPVILLVILIFYFITTVSKQLTYNVWDPQSADFPTLKEVDYP 578

  Fly   563 DWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQES 603
            :|...|.:.:.....||||...|.:..:..   |.:|..:|
Zfish   579 NWISVVIFVLAGVPSLCIPGVAIGRALWRC---CTRRKHKS 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 202/608 (33%)
slc6a19a.1NP_001091648.1 SLC5-6-like_sbd 31..611 CDD:294310 201/603 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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