DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a5

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001009557.1 Gene:slc6a5 / 494450 ZFINID:ZDB-GENE-050105-2 Length:786 Species:Danio rerio


Alignment Length:679 Identity:263/679 - (38%)
Similarity:394/679 - (58%) Gaps:74/679 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DRSGSSDFAGAAATTGRSNPAPWSDDKESPNNEDDSNEDDGDHTTPAKVTDPLAPKLANNERILV 66
            |..|..|     |:||::.....|:::.:.....:.|...||.|:.::.|..|...  .|..:|.
Zfish    90 DSVGKMD-----ASTGKATSDFMSNNQSAVRIAAEHNNSTGDWTSMSQTTIILGTD--GNTSVLP 147

  Fly    67 VSVT----------------------ERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGG 109
            .:||                      .:.|..|..|.:|:|:::|:||.|||||||||:.:||||
Zfish   148 GTVTGPPTDDTGRLFQDDDDDDGGDENKARGNWSNKLDFILSMVGYAVGLGNVWRFPYLAFQNGG 212

  Fly   110 GAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTI 174
            ||||:||.:.|...|:|:|.:|::||||...|.:|:||.| |||:|.|.|:.:|.:.:.:|||.|
Zfish   213 GAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWKAI-PALQGCGIAMLIISVLIAIYYNII 276

  Fly   175 IGWAVYYLFASFTSKLPWTSCDNPWNTENC----------------------------------- 204
            :.|.:||||||....|||.:|.|.|||..|                                   
Zfish   277 MCWTLYYLFASLKETLPWATCKNEWNTVECKDKDMLLLDTCILRDRNITSIKNTTFCLSANVVGN 341

  Fly   205 ----MQVTSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKG 265
                :.||.:|.|.:  ||::|:|:..||...|  |:::.|.::..||.|:|..:::||.||.||
Zfish   342 LSKLLNVTVDNKTYV--SPSEEYFKYNVLHISK--GIEYPGDIRWPLAACLFLAWLIVYASLAKG 402

  Fly   266 VRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLG 330
            ::|:||||:.||..|||||:|||:|||:||||..||.|::||:|.||.::|||.|||:||||||.
Zfish   403 IKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGSGILYFITPKWEKLNDAKVWKDAATQIFFSLS 467

  Fly   331 PGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPG 395
            ..:|.|:.|||||||:||||||.||.:..|..||..||||||||:|:||:..|..|:.|..||||
Zfish   468 AAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIESVADEGPG 532

  Fly   396 LVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLL 460
            :.|:|||||:..:..|.||:|||||||:|||||:.|..:|.::|::.||:|:.:.:.:..|.|:.
Zfish   533 IAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRKHKPQFTLVC 597

  Fly   461 LAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPG 525
            ....|:...|.:|..|:.::..::.:....:::.:...|..|:.:.||:.||..|:|.|:|.:|.
Zfish   598 CLSFFVLGFPMITESGMYMLQLVDTFAASYSLVIIAIFELVGISYIYGLQRFCEDIEMMIGFQPN 662

  Fly   526 LFWRICWTYISPVFLLTIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFF 590
            .|||:||.:::|..|..|...|:..:|.|..|:|.||:||..:||.:...||:.||:....|...
Zfish   663 KFWRVCWAFVTPTILTFILALSLYQWKVMTYEDYTYPNWSMVLGWLMVICSVIWIPIMFAIKMHL 727

  Fly   591 ASKGGCRQRLQESFQPEDNCGSVVPGQQG 619
            | .|...:||:....|:.:.|..:...:|
Zfish   728 A-PGSLIERLKLVCSPQPDWGPFLMKHRG 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 243/571 (43%)
slc6a5NP_001009557.1 SLC5-6-like_sbd 177..775 CDD:294310 246/585 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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