DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a22.1

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_005166076.1 Gene:slc6a22.1 / 368923 ZFINID:ZDB-GENE-030616-629 Length:584 Species:Danio rerio


Alignment Length:566 Identity:251/566 - (44%)
Similarity:353/566 - (62%) Gaps:23/566 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DP-LAPKLA-----NNERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGG 110
            || |..|||     :||..|...:    |..|..|.||:|||.|..:.|||||||||:||:||||
Zfish     6 DPDLQFKLAYSDAQSNETGLKTQI----RGQWSSKVEFILAVAGQIIGLGNVWRFPYLCYKNGGG 66

  Fly   111 AFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTII 175
            .|.:||.:||...|:|||.||.||||:...|.::.|::|||..:|:||...::.:|...||..|:
Zfish    67 VFFIPYVVFLFACGIPLFLMETALGQYTSQGSVTCWRKICPLFEGLGYGSQVVVLYSSAYYIIIL 131

  Fly   176 GWAVYYLFASFTSKLPWTSCDNPWNTENCMQ------VTSENFTELATSPAKEFFERKVLESYKG 234
            .||.:|||:||:.:|||.||.|.||:|||::      ..:.:|...|:||.|||:||:|| :..|
Zfish   132 AWAFFYLFSSFSGELPWASCRNWWNSENCVEFDRMQGAKNLSFMANASSPVKEFWERRVL-NITG 195

  Fly   235 NGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADE 299
            : ::.:|.|:..||||:...:|:.||.:||||:|.||||:.||..|||:|::||:||::||||.:
Zfish   196 S-VNELGSVRWELALCLLLAWVICYFCVWKGVKSTGKVVYFTATFPYVMLMVLLIRGLTLPGAID 259

  Fly   300 GIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTS 364
            ||.:||.|...:|.:.:||:||.:|||:|.....|.|.||.||||:|||||:|.:....:|..||
Zfish   260 GITFYLYPNPARLADPQVWMDAGTQIFYSYALCIGCLTALGSYNKYNNNCYKDCVYLCLLNSGTS 324

  Fly   365 FLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDS 429
            |:|||.||||||:||..|...|..|...||||.||.||.|:|.|..:..|||.||||:|.|||||
Zfish   325 FVAGFAIFSVLGFMALEQGVDISVVAESGPGLAFIAYPRAVAMMPMAQLWSICFFLMIILLGLDS 389

  Fly   430 TFGGLEAMITALCDEYPRVI--GRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYG-PGLA 491
            .|.|||:::||:.|..|...  |.||:||:|::....||..|..:|.||:.:....:.|. .|:.
Zfish   390 EFVGLESLMTAITDMNPNFFLQGHRRKLFLLVICIACFLIGLLMVTEGGLYVFQLFDYYSCSGMT 454

  Fly   492 ILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEM-L 555
            :|.....::..:.||||.||...::..|:|..|....:.||.||:|:..:..||||::.:..: .
Zfish   455 LLLFAIAQSICIGWFYGADRLYENIADMIGYHPLTLMKYCWKYITPIVCIGTFIFSLVKFTPLKF 519

  Fly   556 GEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQ 601
            ...|.||.|.|..||..|.||.|.:|:::||. ...:.|..:|||:
Zfish   520 NNTYEYPWWGYAAGWWFTLSSTLLVPIWMIYA-ILVTPGTLKQRLR 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 242/538 (45%)
slc6a22.1XP_005166076.1 SLC6sbd-TauT-like 30..569 CDD:271387 242/538 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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