DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerT and DAT

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster


Alignment Length:585 Identity:290/585 - (49%)
Similarity:391/585 - (66%) Gaps:44/585 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 RETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFH 138
            ||||..|.:|||:||||||||.|||||||:||:||||||||||.:.|:.||:|||||||||||.:
  Fly    27 RETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQHN 91

  Fly   139 RCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTEN 203
            |.|.::.|.|:.|..||:|||:.||..|:..|||.||.|::.:.|||||:.||||||:|.|||.|
  Fly    92 RKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWNTPN 156

  Fly   204 CMQVTSENFTELAT---------------------------------------SPAKEFFERKVL 229
            |....|:|.:.:..                                       |.|.|:|.|.:|
  Fly   157 CRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFNRYIL 221

  Fly   230 ESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSL 294
            |..:..|:..:|.:|..:|||:..|:::.|||||||:.::|||||.|||.||.||:|||:||::|
  Fly   222 ELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIRGLTL 286

  Fly   295 PGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSI 359
            ||:..||:|||||.:..:..::||:|||:|:|||||||||.|||.:||||::||.|:|||:||.|
  Fly   287 PGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLTSFI 351

  Fly   360 NCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLIT 424
            |..|||:|||||||||||||:.....|:.|..|||||||:|||.|||||..|.||::|||:||:|
  Fly   352 NSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIATMPASTFWALIFFMMLLT 416

  Fly   425 LGLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPG 489
            |||||:|||.||:||||.||:|: |.|.|||||..|.:..|:..|.:.|.||....:.|:.|..|
  Fly   417 LGLDSSFGGSEAIITALSDEFPK-IKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRYAAG 480

  Fly   490 LAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEM 554
            .:||..||.||..|.|.||.:|||.|:..|:|..||.:|::||.:::|:|||.|.::.::||:.:
  Fly   481 YSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVYGLIGYEPL 545

  Fly   555 LGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQR---LQESFQPEDNCGSVVPG 616
            ...:|.||.|:..:||.:..|||:.||...|:| ..::.|..|||   |...::.:.:...|:.|
  Fly   546 TYADYVYPSWANALGWCIAGSSVVMIPAVAIFK-LLSTPGSLRQRFTILTTPWRDQQSMAMVLNG 609

  Fly   617  616
              Fly   610  609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 288/574 (50%)
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 288/571 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440801
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16523at7147
OrthoFinder 1 1.000 - - FOG0000975
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101590
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X639
87.750

Return to query results.
Submit another query.