DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and bdg

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster


Alignment Length:742 Identity:158/742 - (21%)
Similarity:289/742 - (38%) Gaps:147/742 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TTGRSN--PAPWSDDKESPNNEDDSNEDDGD----HTT---PAKVTDPLAPKLANNERILVVSVT 70
            ::.||:  |:|.|...:|.::...|.|.|.:    .||   .|..|.||.|.     ..|.:.:.
  Fly   429 SSARSSRMPSPVSLPSDSSSSGSSSAEHDQEPDPVQTTTMCSASSTTPLEPL-----HQLQLLLR 488

  Fly    71 ERT--RETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELA 133
            |:.  ...|.......||:||..:.:.|:.||..:.. |.||.||:.:.|..:..|:||.::::.
  Fly   489 EKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMC 552

  Fly   134 LGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASF----TSKLPWTS 194
            ||...|.|.:|:|| |.|...|||.|:.:...::.:|....:.|.:.||...|    .|...|..
  Fly   553 LGAKIRAGPVSMWK-ISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQE 616

  Fly   195 CDNPWNTENCMQVTSENFTELATSPAKEFFERKVLES-YKGNGLDFMGPVK-----PTLALCVFG 253
            ...|:..:      :.|.|...|....|:|...||:. :..|..|..| ::     ..||..:..
  Fly   617 MAFPYRYD------ASNATGNLTQTVAEYFNVVVLQRLHLANHPDASG-IRFHVNDRQLAFYLAL 674

  Fly   254 VFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHK-LKNSKV 317
            ::..|:..|.||::|.||:.::....|.|.|.::..:.|.:.........:...::.. |.||..
  Fly   675 IWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDDFLVNSNS 739

  Fly   318 WIDAASQIFFSLGPGFGTLLALSSYNKFNNN---CYRDALIT----------------------- 356
            |..|..:.|.:.|....:::|::|.:..|.|   ..|||::.                       
  Fly   740 WTAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILW 804

  Fly   357 -----------SSINCLTS----------FLAGFVIFSVLGYMAYV------QKTSID-KVGLEG 393
                       .:.:|.||          :|..:....:..|.:::      .:|.|. :.|.:.
  Fly   805 QHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQA 869

  Fly   394 PGLVFIVYPEAIATMSGSV--FWSIIFFLMLITLGLDSTFGGLE-AMITALCDEYPRVIGRRREL 455
            ...:..::|..::..|.|:  .|:.:.|         :||.|.. |.:..:.......:|.... 
  Fly   870 LRFISEIFPAVLSLASDSISWVWAAVAF---------ATFAGFGLAQLCVMWKPISSALGNSTS- 924

  Fly   456 FVLLLLAFIFLCALPTMTYGGVVLVNFLN-VYGPGLAILFVVFVEAAGVFWF----YGVDRFSSD 515
            .|||......|.::|..|..|:.::.::: :.|....|..:...:..|||..    |..|...:|
  Fly   925 SVLLSCVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFLIRGRPYNGDDLVND 989

  Fly   516 VEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEMLGEEYYY-------PDWSYQVGWAVT 573
            : ::.||. ..|..:.|..:.|:.|:|:   |::.||..|..::||       ..||.::|..:.
  Fly   990 L-RLCGSM-SAFLALSWNVLLPIGLITL---SVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQ 1049

  Fly   574 CSSVLCIPMYI---IYKFFFASKGGCRQRLQESFQPEDNCGSVVPGQQGTSVXHDHAQVHVNIRT 635
            ...:|.||:..   ||::.........:|:|..::|.         ::|.......|:...:   
  Fly  1050 IGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRPP---------EEGEEPRRPSARQTAS--- 1102

  Fly   636 SCTSIKIYNLNCSSNSNSLSPTTSGAE 662
                        .|..|:|..||.|.:
  Fly  1103 ------------QSRRNALGQTTEGGQ 1117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 131/615 (21%)
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 104/493 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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