DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerT and CG1698

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster


Alignment Length:630 Identity:210/630 - (33%)
Similarity:333/630 - (52%) Gaps:51/630 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FAGAAATTGRSNPAPWSDDKESPNNEDDSNEDDGDHTTPAKVTDPLAPKLANNERILVVSVTERT 73
            :.|:...:..|.|..:..: ||.|.:...:|..|....|.....|...:...         ..:.
  Fly    19 YVGSLNASTISIPGAYKPN-ESSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQ---------PGKK 73

  Fly    74 RETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFH 138
            |::|....|||::.|..:|.||||||||:...:||||||::||.:.||..|.|::|:|:.||||.
  Fly    74 RDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFS 138

  Fly   139 RCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTEN 203
            ..|.:.::. ..|.::|:||...|....:..||.|::...:.|...||...|||:.|...|.|| 
  Fly   139 SRGSVKVYD-FSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGTE- 201

  Fly   204 CMQ---VTSENFTELATSPAK----EFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFS 261
            |:.   ..:...|.||.|..:    ||:...::...|.:..|.:|....:|||.:...::::...
  Fly   202 CLDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAWIVIAGI 266

  Fly   262 LWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIF 326
            ::|||:|:||..:..||.||||:::||||.::||||.:|:.|:|.|:||||...:||..|.:|:|
  Fly   267 MFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVF 331

  Fly   327 FSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTS-IDKVG 390
            |||...||.::..:|||:|.:|.||||.|.::::..||.|:|.:||.:||.:||...|: |..|.
  Fly   332 FSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIASVV 396

  Fly   391 LEGPGLVFIVYPEAIATMSGSVFW-----SIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIG 450
            ..||||.||.||:|||...    |     |::|||||..||:.|..|....|.|.:.|::    |
  Fly   397 NGGPGLAFISYPDAIAKFK----WLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQF----G 453

  Fly   451 RRRELFVLLLLAFI-FLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSS 514
            ..:...|::.:|.: :...|..:|.||..|:|.::.:|.....|.:...|...:.|.|||.|...
  Fly   454 HLKNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCR 518

  Fly   515 DVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLC 579
            |||.|:|.|..|::||||..::|:.:|||.|::::.|:.:..::|.|....|..||        |
  Fly   519 DVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGW--------C 575

  Fly   580 IPMYIIYKFFF---------ASKGGCRQRLQESFQPEDNCGSVVP 615
            :..:.:.:..|         .|..|...|::::|:|..|.|...|
  Fly   576 LSAFGVGQVLFWAIPAVRKQPSHLGLWARIRKAFEPLPNWGPSDP 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 196/555 (35%)
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 183/486 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440743
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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