DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and SLC6A18

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_872438.2 Gene:SLC6A18 / 348932 HGNCID:26441 Length:628 Species:Homo sapiens


Alignment Length:605 Identity:206/605 - (34%)
Similarity:307/605 - (50%) Gaps:102/605 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPY 116
            ||.|..|.:.            |..|..||::||:..||||.|||:|||||:|...||||||:||
Human     8 DPAACDLGDE------------RPKWDNKAQYLLSCTGFAVGLGNIWRFPYLCQTYGGGAFLIPY 60

  Fly   117 CLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYY 181
            .:.|:|.|:|:|::|||:||..|.|.:.:|..|.|.|.|||.....:...:.:|||||:.|.::|
Human    61 VIALVFEGIPIFHVELAIGQRLRKGSVGVWTAISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWY 125

  Fly   182 LFASFTSKLPWTSCDNPWN----TENCMQVTSENFTELATSPAKEFFERKVLESYKGNGLDFMGP 242
            |..||...|||:||....|    .|.|.          .:|....|:.|:.|....  .::..|.
Human   126 LLNSFQHPLPWSSCPPDLNRTGFVEECQ----------GSSAVSYFWYRQTLNITA--DINDSGS 178

  Fly   243 VKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTP 307
            ::..|.:|:...:.:||..:.:|:.:.|||::.|||.||:||.|.|:||::||||.:|:.|..||
Human   179 IQWWLLICLAASWAVVYMCVIRGIETTGKVIYFTALFPYLVLTIFLIRGLTLPGATKGLIYLFTP 243

  Fly   308 EWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIF 372
            ..|.|:|.:||:|||:||||||...||..:|.:|||...|:|.:||::.:.:|.:||..|...:|
Human   244 NMHILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNSPRNDCQKDAVVIALVNRMTSLYASIAVF 308

  Fly   373 SVLGYMA------------------------------------YVQKT----------------- 384
            ||||:.|                                    ::..|                 
Human   309 SVLGFKATNDYEHCLDRNILSLINDFDFPEQSISRDDYPAVLMHLNATWPKRVAQLPLKACLLED 373

  Fly   385 SIDKVGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCD--EYPR 447
            .:|| ...||||.|:|:.|....|.|:..|:::||.||.||||.:.||.:||:||.|.|  ..||
Human   374 FLDK-SASGPGLAFVVFTETDLHMPGAPVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDVGVLPR 437

  Fly   448 VIGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRF 512
            .:.:.....::.|:.|:..... |:..|...|..|.| :.....:|.:.|:|..||.:.||:.||
Human   438 WVPKEALTGLVCLVCFLSATCF-TLQSGNYWLEIFDN-FAASPNLLMLAFLEVVGVVYVYGMKRF 500

  Fly   513 SSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSI-------MGYK------EML--GEEYYYP 562
            ..|:..|.|.:|..:||:.|..:||: |||||:..|       :.||      |:.  .:|..||
Human   501 CDDIAWMTGRRPSPYWRLTWRVVSPL-LLTIFVAYIILLFWKPLRYKAWNPKYELFPSRQEKLYP 564

  Fly   563 DWSYQVGWAVTCSSVLCIPM 582
            .|:......::...||.:|:
Human   565 GWARAACVLLSLLPVLWVPV 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 202/583 (35%)
SLC6A18NP_872438.2 SLC6sbd_B0AT3 17..591 CDD:212086 202/596 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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