DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerT and CG13796

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster


Alignment Length:582 Identity:141/582 - (24%)
Similarity:246/582 - (42%) Gaps:96/582 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 ERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQ--------NGGG-AFLVPYCLFLIFGGLP 126
            ::.|..|.:.|:|..|....|        |..:.:.        :||. .|::.|.:.::|..||
  Fly    81 DKCRGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLP 137

  Fly   127 LFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLP 191
            :|.::..||||...|.:|.: |:.|..||:||||.|:::....||:......:.|...|....:|
  Fly   138 IFLIQAFLGQFSSSGTISAF-RVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIP 201

  Fly   192 WTSCDNPWNTENCMQVTSENFTELATSP--AKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGV 254
            |.||:|.|||:.|....:.:..:....|  ..|||...:..:.||:   ....:..::.:.|..:
  Fly   202 WMSCNNSWNTQECSLHENYDVDDYRVDPHSTVEFFRSMIASTAKGS---TSMSISWSMLIGVLSI 263

  Fly   255 FVLVYFSLWKGVRSAGKVVWVTALAPY-----VVLIILLVRGVSLPGADEGIKYYLTPEWHKLKN 314
            :::|...|.|.|...|||:..:.:..:     |.|.:|:...|:.    :.:.||..|:....  
  Fly   264 WLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTF----DTLHYYWMPQLDSF-- 322

  Fly   315 SKVWIDAASQIFF---SLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLG 376
            ..:...|.:.:..   :||||:|:::.|||||.|.    |||...|...|||....|     ::|
  Fly   323 DSILATARTALLMAGGALGPGWGSIITLSSYNNFR----RDAERLSIWVCLTHITIG-----LMG 378

  Fly   377 YMA--YVQKTSIDKVGL------EGPGLVFI------VYPEAIATMSGSVFWSIIFFLMLITLGL 427
            .:.  .......|.||:      |...:.|:      ::.....|.:   .|:.:||.|:....|
  Fly   379 LLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTTPN---LWAFLFFGMIFLSEL 440

  Fly   428 DSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYG----- 487
            .:....:.::||||.||:..:..||     :|:::.:..|...:..|       |....|     
  Fly   441 CALIIQMMSVITALFDEFETLRSRR-----ILVISSLVFCLTASSVY-------FCTQLGFSQLT 493

  Fly   488 --PGLAILFVVFVEAAGVF---WFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFL-LTIFIF 546
              |.||:...:.:....|.   |.||..||..|::.|||.....|......:.:|:|| |.:|..
  Fly   494 QLPNLAVFTHLLISGILVLMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGLCLFQL 558

  Fly   547 SIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQESFQPED 608
            :.:..::.:.:...|......:..|::         |::|| ...:.|..|||||:...|.|
  Fly   559 TYLFTRDRIHDVLIYVSQGLILLTAIS---------YMVYK-VCRTNGDWRQRLQQCLAPHD 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 139/576 (24%)
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 131/530 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440807
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.