DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and CG13795

DIOPT Version :10

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster


Alignment Length:596 Identity:144/596 - (24%)
Similarity:264/596 - (44%) Gaps:87/596 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDL----GNVWRFPYICYQNGGGAFL 113
            |.:|.|              .|..|.:..:|:.|..|.|:.|    .:.|.|     .:.|...:
  Fly    13 PFSPDL--------------NRGKWDKPTDFMFACFGLALKLDVFVASFWMF-----FDMGILGI 58

  Fly   114 VPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWA 178
            :||.:::....:|:..:...:|||...|.:|.: |:.|..||:||....:.|.|.:||:......
  Fly    59 LPYFVYMSIYLVPIMVIHSFMGQFSSSGFISAF-RLSPFFKGMGYVSGFLTISMLIYYSIFAAVP 122

  Fly   179 VYYLFASFTSKLPWTSCD--NPWNTENCMQVTS-------ENFTELATS------PAKEFFER-- 226
            :.::..||...||| ||:  :.|:..:....:|       |:|:|...|      |:..:|:.  
  Fly   123 LLFIINSFRPTLPW-SCEGLSSWHNGSATLSSSCNKTLILEDFSEYNRSHQLLHVPSVLYFQNHY 186

  Fly   227 ------KVLESYKGNGLD--FMGPVKPTLALCVFG-VFVLVYFSLWKGVRSA--GKVVWVTALAP 280
                  .|.:.||...|.  |:|         :|. ::|::.|..:|...:|  ||::....:..
  Fly   187 DSMQQDAVPDWYKDYELSWHFVG---------LFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVT 242

  Fly   281 YVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAAS---QIFFSLGPGFGTLLALSSY 342
            .|:|::..||.:.||||..|:..|:||     |.|.:.:...|   .:..:.|.|:|:::.|||:
  Fly   243 LVLLLVCFVRFLFLPGALNGLHRYVTP-----KASDMAMGVVSTFIMVLHAFGAGWGSVITLSSF 302

  Fly   343 NKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVG-LEGPGLVFIVYPEAIA 406
            |.|..:....:.|.|........:.|.|.|.:..|  :.:.:.:|..| :....|:::....|::
  Fly   303 NGFKTDIMSYSWIISFGQIFIYIMFGMVSFMLEHY--FNELSDVDDNGHVLSHWLLYLSSASALS 365

  Fly   407 TMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALPT 471
            ||:....|:.|::.||:...|......:..::.:|.||: .|:..|::.....|:..|.||:...
  Fly   366 TMAWPNLWTFIYYSMLLIAALIVMTTQIFTVLQSLFDEF-EVLRVRKQEVTFGLIGGIALCSFYF 429

  Fly   472 MTYGGVVLVNFLN---VYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRI-CW 532
            .|..|::..:.|.   ::...|..|.::.|    |.|.||.:||..|:|.||| :|...|:: ..
  Fly   430 CTNHGIIFFSALGLDAIFSHSLLHLLLLLV----VLWIYGRERFQRDIEFMLG-QPFASWKVFIL 489

  Fly   533 TYISPVFLLTIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCR 597
            .:|:|:.|:   |..:.|....:.|..|.....:.:...:....:|.||.|..| :.:.|.|...
  Fly   490 RFIAPIILV---ICLLAGIALSISEHSYSTTVVFVMSIVLVVLPILAIPGYGFY-YLYQSTGTFC 550

  Fly   598 QRLQESFQPED 608
            :|.:.:.:|.|
  Fly   551 ERFKRTCRPTD 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 139/572 (24%)
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 126/509 (25%)

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