DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and SLC6A19

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001003841.1 Gene:SLC6A19 / 340024 HGNCID:27960 Length:634 Species:Homo sapiens


Alignment Length:636 Identity:221/636 - (34%)
Similarity:319/636 - (50%) Gaps:101/636 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPY 116
            |...|.||..|.|.....:.|.:  |..||:::|..:||.|.|||||||||:|..:|||||::|:
Human    12 DARIPSLAELETIEQEEASSRPK--WDNKAQYMLTCLGFCVGLGNVWRFPYLCQSHGGGAFMIPF 74

  Fly   117 CLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYY 181
            .:.|:..|:||.|:|.|:||..|.|.|.:|..|.|||||:|.|..|....:|:||||||.|.::|
Human    75 LILLVLEGIPLLYLEFAIGQRLRRGSLGVWSSIHPALKGLGLASMLTSFMVGLYYNTIISWIMWY 139

  Fly   182 LFASFTSKLPWTSCDNPWNTENCMQVTSENFT----ELA-TSPAKEFFERKVLESYKGNGLDFMG 241
            ||.||...|||:.|  |.|         ||.|    |.| :||...|:.|:.|..  ...:...|
Human   140 LFNSFQEPLPWSDC--PLN---------ENQTGYVDECARSSPVDYFWYRETLNI--STSISDSG 191

  Fly   242 PVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLT 306
            .::..:.||:...:.::|....:|:.:.||.|::|:..|||||.|.|:||::|.||..||.:..|
Human   192 SIQWWMLLCLACAWSVLYMCTIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKGATNGIVFLFT 256

  Fly   307 PEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVI 371
            |...:|.....|:||.:|:|||....||.|::.||||..:|||.:|::|.|.||..||.....|:
Human   257 PNVTELAQPDTWLDAGAQVFFSFSLAFGGLISFSSYNSVHNNCEKDSVIVSIINGFTSVYVAIVV 321

  Fly   372 FSVLGYMA-------------------------YVQKTSID------------------------ 387
            :||:|:.|                         ..|:..:|                        
Human   322 YSVIGFRATQRYDDCFSTNILTLINGFDLPEGNVTQENFVDMQQRCNASDPAAYAQLVFQTCDIN 386

  Fly   388 ---KVGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVI 449
               ...:||.||.|||:.|||..|..|..||::||:||..|||.|.||.:|.::..|.|  .|||
Human   387 AFLSEAVEGTGLAFIVFTEAITKMPLSPLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQD--LRVI 449

  Fly   450 GRR--RELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRF 512
            ..:  :|:...|:....||.........|...::.|:.|...:.:|.:.|.|...|.:.||||||
Human   450 PPKWPKEVLTGLICLGTFLIGFIFTLNSGQYWLSLLDSYAGSIPLLIIAFCEMFSVVYVYGVDRF 514

  Fly   513 SSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIM--------------GYKEM-LGEEYYYP 562
            :.|:|.|:|.||.:||::.|..:||:.:|.||:|..:              ||:|. ..::..||
Human   515 NKDIEFMIGHKPNIFWQVTWRVVSPLLMLIIFLFFFVVEVSQELTYSIWDPGYEEFPKSQKISYP 579

  Fly   563 DWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQESFQPEDNCGSV 613
            :|.|.|...|.....|.||.|.|||..   :..|:       :|.|:.|.|
Human   580 NWVYVVVVIVAGVPSLTIPGYAIYKLI---RNHCQ-------KPGDHQGLV 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 210/606 (35%)
SLC6A19NP_001003841.1 SLC5-6-like_sbd 32..612 CDD:294310 211/606 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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