DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and NAAT1

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster


Alignment Length:645 Identity:206/645 - (31%)
Similarity:326/645 - (50%) Gaps:87/645 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SGSSDFAGAAATTGRSNPAPWSDDKESPNNEDDSNEDDGDHTTPAKVTDPLAPKLANNERILVVS 68
            :|||:.:|..||...|..   ..|.|.|..|                                  
  Fly    10 NGSSNGSGNGATNAASTE---KTDAEKPTAE---------------------------------- 37

  Fly    69 VTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELA 133
                 |..||...|||::.|..:|.||||||||:..|:|||||||:||.:.|...|.|::|:|:.
  Fly    38 -----RTNWGNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMI 97

  Fly   134 LGQFHRCGCLSIWKRICPALKGVGY-----AICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWT 193
            :|||...|.:.||. :.|...||||     .||:|.     ||::::...:||||.||.|:|||:
  Fly    98 MGQFTSQGTVKIWS-VVPGFVGVGYGQAFGTICIIS-----YYSSLLALTLYYLFVSFQSELPWS 156

  Fly   194 SCDNPWNTENCMQ--------------------------VTSENFTELATSPAKEFFERKVLESY 232
            .|.:.|.  ||:.                          :.:.:.||...|.::.:|...|::. 
  Fly   157 YCRDEWT--NCVNSRPQEYVDNLLTGVSLANESARNLSGIVANDETEKLQSSSELYFLNVVIKE- 218

  Fly   233 KGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGA 297
            |.:..|.:|.....|.|.:|..:|:::..:.:||:|:||..:..||.|||||.:||:|.|:|.||
  Fly   219 KLDISDGVGDPDWKLTLALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLLIRAVTLEGA 283

  Fly   298 DEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCL 362
            .:||.::|.|:|.:|.|..||.:|..|.||||..|.|.::..:|||:|::..||||:|.::::.|
  Fly   284 RDGILFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDAMIVTTLDTL 348

  Fly   363 TSFLAGFVIFSVLGYMAY-VQKTSIDKVGLEGPGLVFIVYPEAIATMSG-SVFWSIIFFLMLITL 425
            ||.|.|..||::||.:|: :|..:|..|...|.||.||.||:||:.... ...:|::||.||..|
  Fly   349 TSLLGGITIFAILGNLAHNLQIENIRDVVRSGTGLAFISYPDAISKFQAVPQLFSVLFFFMLFVL 413

  Fly   426 GLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGL 490
            |:.|.......::|.:||::.   |.:.....|......||..|..:|.||..::..::.||...
  Fly   414 GIGSIVALQSTIVTIICDQFK---GWKYWKVALTTSVCGFLMGLVYVTPGGQWILTLVDFYGGTY 475

  Fly   491 AILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEML 555
            .:..:...|.||:.|.||:..|..|:|.|...:..|:||:||::.:||.::.|||:|::..:.:.
  Fly   476 VVFILAIFELAGIVWVYGLQNFCDDIEFMCNRRVSLYWRVCWSFFTPVMMIIIFIYSMVTIEPIK 540

  Fly   556 GEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQESFQPEDNCGSVVP 615
            ..|.|:|:.:...||.:........|::.::......:|...:.|:.|.:|.|..|...|
  Fly   541 YSELYFPEAANIAGWLLFAIGAAQFPLWGLWYISRHPQGTYWKSLKASLKPSDRWGPANP 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 191/565 (34%)
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 180/504 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440742
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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