DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerT and Slc6a7

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_006525992.1 Gene:Slc6a7 / 240332 MGIID:2147363 Length:684 Species:Mus musculus


Alignment Length:547 Identity:244/547 - (44%)
Similarity:342/547 - (62%) Gaps:12/547 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 RETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFH 138
            |..|..|.:|||:.||:.|.|||||||||..|.||||||||||.|.|...|:|||::||:||||.
Mouse    84 RGNWTGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFLMLAICGIPLFFLELSLGQFS 148

  Fly   139 RCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTEN 203
            ..|.|::|| |.|..||.|.|:.||...:.:|||.||.:.::|||||.||.|||..|.|.||||.
Mouse   149 SLGPLAVWK-ISPLFKGAGAAMLLIVGLVAIYYNMIIAYVLFYLFASLTSNLPWEHCGNWWNTEL 212

  Fly   204 CMQ---------VTSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVY 259
            |::         |...|.:. ..||::|::.|.||......|:...|.::..|.||:...:|:|:
Mouse   213 CLEHRGPKSGNGVLPLNLSS-TVSPSEEYWSRYVLHIQGSQGIGRPGEIRWNLCLCLLLAWVIVF 276

  Fly   260 FSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQ 324
            ..:.|||:|:||||:.||..||::|::||||||:||||.:||::||||::|.|.:|||||:||.|
Mouse   277 LCILKGVKSSGKVVYFTATFPYLILLMLLVRGVTLPGAWKGIQFYLTPQFHHLLSSKVWIEAALQ 341

  Fly   325 IFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKV 389
            ||:|||.|||.||..:|||.|:.|.|||..|.:..|.:||.||||.||||||||:......:|:|
Mouse   342 IFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAITSILAGFAIFSVLGYMSQELGVPVDQV 406

  Fly   390 GLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRE 454
            ...||||.|:|||:|:..:..|.|||.:||.||:||||||.|..||.::||:.||:|..:..::.
Mouse   407 AKAGPGLAFVVYPQAMTMLPLSPFWSFLFFFMLLTLGLDSQFAFLETIVTAVTDEFPYYLRPKKA 471

  Fly   455 LFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQM 519
            :|..|:...::|..|...|.||:..:..|:.|.....::.||......|...||:.||..|:..|
Mouse   472 VFSGLICVAMYLMGLILTTDGGMYWLVLLDDYSASFGLMVVVITTCLAVTRVYGIQRFCRDIHMM 536

  Fly   520 LGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYI 584
            ||.||||::|.||.::||..||.:.::||:.|:......|.:|.|:..:|..:...|.|.||..:
Mouse   537 LGFKPGLYFRACWLFLSPATLLALLVYSIVKYQPSEYGSYRFPAWAELLGILMGLLSCLMIPAGM 601

  Fly   585 IYKFFFASKGGCRQRLQESFQPEDNCG 611
            :.. ....:|...:|||::.:|..:.|
Mouse   602 LVA-VLREEGSLWERLQQASRPAMDWG 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 242/541 (45%)
Slc6a7XP_006525992.1 SLC5-6-like_sbd 84..628 CDD:382020 244/547 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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