DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerT and Slc6a6

DIOPT Version :10

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_033346.2 Gene:Slc6a6 / 21366 MGIID:98488 Length:621 Species:Mus musculus


Alignment Length:635 Identity:253/635 - (39%)
Similarity:365/635 - (57%) Gaps:61/635 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KESPNNEDDSN-EDDGDHTTPAKVTDPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFA 91
            |.||.....:. ||:.|...|                         .||.|..|.:|:|:|.|..
Mouse    19 KPSPGKSPGTRPEDEADGKPP-------------------------QREKWSSKIDFVLSVAGGF 58

  Fly    92 VDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGV 156
            |.|||||||||:||:|||||||:||.:||...|||:|::|:.:||:...|.::.|::|||...|:
Mouse    59 VGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGSGLPVFFLEVIIGQYTSEGGITCWEKICPLFSGI 123

  Fly   157 GYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQ------------VTS 209
            |||..:|...:.:||..|:.||.||||.||...|||..|::.|||..||:            :::
Mouse   124 GYASIVIVSLLNVYYIVILAWATYYLFHSFQKDLPWAHCNHSWNTPQCMEDTLRRNESHWVSLST 188

  Fly   210 ENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVW 274
            .||    |||..||:||.||.  ..:|:|..|.:|..||||:..|:::.:|.:||||||.||||:
Mouse   189 ANF----TSPVIEFWERNVLS--LSSGIDNPGSLKWDLALCLLLVWLVCFFCIWKGVRSTGKVVY 247

  Fly   275 VTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLAL 339
            .||..|:.:|::|||||::||||.||||:||.|:..:|.:.:|||||.:|||||.....|.:.:|
Mouse   248 FTATFPFAMLLVLLVRGLTLPGAGEGIKFYLYPDISRLGDPQVWIDAGTQIFFSYAICLGAMTSL 312

  Fly   340 SSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEA 404
            .||||:..|.|||.::...:|..|||::||.|||:||:||..|...|..|...||||.||.||:|
Mouse   313 GSYNKYKYNSYRDCMLLGCLNSGTSFVSGFAIFSILGFMAQEQGVDIADVAESGPGLAFIAYPKA 377

  Fly   405 IATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVI--GRRRELFVLLLLAFIFLC 467
            :..|....||||:||:||:.|||||.|..:|..||:|.|.||..:  |.|||:|:.:|.:..:|.
Mouse   378 VTMMPLPTFWSILFFIMLLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAILCSISYLL 442

  Fly   468 ALPTMTYGGVVLVNFLNVY-GPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRIC 531
            .|..:|.||:.:....:.| ..|:.:|:|.|.|...:.|.||.|.....:|.|:|.:||.:.:..
Mouse   443 GLTMVTEGGMYVFQLFDYYAASGVCLLWVAFFECFVIAWIYGGDNLYDGIEDMIGYRPGPWMKYS 507

  Fly   532 WTYISPVFLLTIFIFSIMGYKEM-LGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGG 595
            |..|:|...:..|:||::.|..: ..:.|.||||:..:||.:..||:||||:.|:. ....::|.
Mouse   508 WAVITPALCVGCFVFSLVKYVPLTYNKVYRYPDWAIGLGWGLALSSMLCIPLVIVI-LLCRTEGP 571

  Fly   596 CRQRLQESFQP-EDNCGSVVPGQQGTSVXHDHAQV---------HVNIRT 635
            .|.|::....| |.|..:|  .::|.:. |....:         ||.:.|
Mouse   572 LRVRIKYLITPREPNRWAV--EREGATPFHSRVTLMNGALMKPSHVIVET 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 238/549 (43%)
Slc6a6NP_033346.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 7/47 (15%)
SLC5-6-like_sbd 41..582 CDD:444915 237/547 (43%)

Return to query results.
Submit another query.