DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and Slc6a9

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001342104.1 Gene:Slc6a9 / 14664 MGIID:95760 Length:652 Species:Mus musculus


Alignment Length:600 Identity:245/600 - (40%)
Similarity:356/600 - (59%) Gaps:42/600 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 HTTPAKVTDPLAPKLANNERILVVSVTER----TRETWGQKAEFLLAVIGFAVDLGNVWRFPYIC 104
            |...|....|:|.........:....|::    ||..||.:.||:|..:|:||.|||||||||:|
Mouse    12 HPGMASAQGPVATPSPEQNGAVPSEATKKDQNLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLC 76

  Fly   105 YQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGM 169
            |:||||||:.||.:.|||.|:|||:|||:.|||...|||.:| ||.|..|||||.:.::..|:|:
Mouse    77 YRNGGGAFMFPYFIMLIFCGIPLFFMELSFGQFASQGCLGVW-RISPMFKGVGYGMMVVSTYIGI 140

  Fly   170 YYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQVTSE--------------------NFTE 214
            |||.:|..|.||.|:|.|..|||..|:|||||.:|..|...                    |:|.
Mouse   141 YYNVVICIAFYYFFSSMTHVLPWAYCNNPWNTPDCAGVLDASNLTNGSRPAALSGNLSHLFNYTL 205

  Fly   215 LATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALA 279
            ..|||::|::...||:  ..:.:...|.|:..|..|:...:|:|:..|.:||:|:||||:.||..
Mouse   206 QRTSPSEEYWRLYVLK--LSDDIGNFGEVRLPLLGCLGVSWVVVFLCLIRGVKSSGKVVYFTATF 268

  Fly   280 PYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNK 344
            |||||.||.||||:|.||..||.|||||:|.|:..:|||.|||||||:|||..:|.|:.::||||
Mouse   269 PYVVLTILFVRGVTLEGAFTGIMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNK 333

  Fly   345 FNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAIATMS 409
            |:||||||::|.|..||.||..|||||||:||:||......:.:|...||||.|:.||||:..:.
Mouse   334 FHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLP 398

  Fly   410 GSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFI-FLCALPTMT 473
            .|..||::||.|||.|||.:.|..||.::||:.||.......:::.:|.|.:|.. ||..:|..:
Mouse   399 ISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTS 463

  Fly   474 YGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPV 538
            ..|:..:..::.|....:::.:..:....:.:.||...:..|::.|||..|.||::|||.::||.
Mouse   464 QAGIYWLLLMDNYAASFSLVVISCIMCVSIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPA 528

  Fly   539 FLLTIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCR------ 597
            .:..|.||:::.|:.:....|.||.|:..:|:.:..|||:|||:|.:::.       ||      
Mouse   529 IIFFILIFTVIQYRPITYNHYQYPGWAVAIGFLMALSSVICIPLYALFQL-------CRTDGDTL 586

  Fly   598 -QRLQESFQPEDNCG 611
             |||:.:.:|..:.|
Mouse   587 LQRLKNATKPSRDWG 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 237/560 (42%)
Slc6a9NP_001342104.1 SLC6sbd_GlyT1 30..613 CDD:212067 240/581 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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