DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerT and Slc6a15

DIOPT Version :10

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_780537.1 Gene:Slc6a15 / 103098 MGIID:2143484 Length:729 Species:Mus musculus


Alignment Length:661 Identity:213/661 - (32%)
Similarity:333/661 - (50%) Gaps:126/661 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PNNEDDSNED-DGDHTTPAKVTDPLAPKLANNERI--------LVVSVTER-------------T 73
            |.|......| |.|      |.:.:...|:|.:.:        |:|.|.|.             .
Mouse     2 PKNSKVVKRDLDDD------VIESVKDLLSNEDSVEEVSKKSELIVDVQEEKDTDAEDGSEADDE 60

  Fly    74 RETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFH 138
            |..|..|.:::||.:||:|.|||||||||:|.:|||||:|:||.:.|:..|:|||::||::||..
Mouse    61 RPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLLPYLILLLVIGIPLFFLELSVGQRI 125

  Fly   139 RCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTEN 203
            |.|.:.:|..|.|.|.|:|:|.|::..::.:|||.||||.::|...||...|||..|....|..:
Mouse   126 RRGSIGVWNYISPKLGGIGFASCVVCYFVALYYNVIIGWTLFYFSQSFQQPLPWDQCPLVKNASH 190

  Fly   204 ------CMQVTSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSL 262
                  |.|.::..:          ::.|:.|:.  .:.:...|.:...:.:|:...:|:|..::
Mouse   191 TYVEPECEQSSATTY----------YWYREALDI--TSSISDSGGLNWKMTVCLLVAWVMVCLAM 243

  Fly   263 WKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFF 327
            .||::|:||:::.::|.||||||..|:|.:.|.|:.:||::..||:...:...|||.:||:|:||
Mouse   244 IKGIQSSGKIMYFSSLFPYVVLICFLIRSLLLNGSIDGIRHMFTPKLEMMLEPKVWREAATQVFF 308

  Fly   328 SLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMA------------- 379
            :||.|||.::|.|||||.:|||:.||::.|.||..||.||..|:|:|||:.|             
Mouse   309 ALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATLVVFAVLGFKANIVNEKCISQNSE 373

  Fly   380 -----------------------------------YVQKTSIDKV----------------GLEG 393
                                               .:||...::.                .::|
Mouse   374 MILKLLKMGNISWDVIPHHINLSAVTVEDYRLVYDIIQKVKEEEFAVLHLNACQIEDELNKAVQG 438

  Fly   394 PGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVL 458
            .||.||.:.||:.....|.|||::||||||.|||.|.||.:|.:||.:.|.: :|   |:|:..:
Mouse   439 TGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGSMFGTIEGIITPIVDTF-KV---RKEILTV 499

  Fly   459 LLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSK 523
            :.....|...|..:...|...|...:.|...|.:|.||.:|...|.:.||:|:|..|:..|||..
Mouse   500 ICCLLAFCIGLIFVQRSGNYFVTMFDDYSATLPLLIVVILENIAVSFVYGIDKFIEDLTDMLGFA 564

  Fly   524 PGLFWRICWTYISPVFLLTIFIFSIM-------GY----KEMLGEEYY-YPDWSYQVGWAVTCSS 576
            |..::...|.||||:.|||:.|.||:       ||    ||...||:. ||.|...|.:::...:
Mouse   565 PSKYYYYMWKYISPLMLLTLLIASIVNMGLSPPGYNAWIKEKASEEFLSYPMWGMVVCFSLMVLA 629

  Fly   577 VLCIPMYIIYK 587
            :|.:|:..|.:
Mouse   630 ILPVPVVFIIR 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 201/596 (34%)
Slc6a15NP_780537.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..61 2/18 (11%)
SLC6sbd_SBAT1 61..640 CDD:212091 201/594 (34%)

Return to query results.
Submit another query.