DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerT and Slc6a15

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001239259.1 Gene:Slc6a15 / 103098 MGIID:2143484 Length:729 Species:Mus musculus


Alignment Length:661 Identity:213/661 - (32%)
Similarity:333/661 - (50%) Gaps:126/661 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PNNEDDSNED-DGDHTTPAKVTDPLAPKLANNERI--------LVVSVTER-------------T 73
            |.|......| |.|      |.:.:...|:|.:.:        |:|.|.|.             .
Mouse     2 PKNSKVVKRDLDDD------VIESVKDLLSNEDSVEEVSKKSELIVDVQEEKDTDAEDGSEADDE 60

  Fly    74 RETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFH 138
            |..|..|.:::||.:||:|.|||||||||:|.:|||||:|:||.:.|:..|:|||::||::||..
Mouse    61 RPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLLPYLILLLVIGIPLFFLELSVGQRI 125

  Fly   139 RCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTEN 203
            |.|.:.:|..|.|.|.|:|:|.|::..::.:|||.||||.::|...||...|||..|....|..:
Mouse   126 RRGSIGVWNYISPKLGGIGFASCVVCYFVALYYNVIIGWTLFYFSQSFQQPLPWDQCPLVKNASH 190

  Fly   204 ------CMQVTSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSL 262
                  |.|.::..:          ::.|:.|:.  .:.:...|.:...:.:|:...:|:|..::
Mouse   191 TYVEPECEQSSATTY----------YWYREALDI--TSSISDSGGLNWKMTVCLLVAWVMVCLAM 243

  Fly   263 WKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFF 327
            .||::|:||:::.::|.||||||..|:|.:.|.|:.:||::..||:...:...|||.:||:|:||
Mouse   244 IKGIQSSGKIMYFSSLFPYVVLICFLIRSLLLNGSIDGIRHMFTPKLEMMLEPKVWREAATQVFF 308

  Fly   328 SLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMA------------- 379
            :||.|||.::|.|||||.:|||:.||::.|.||..||.||..|:|:|||:.|             
Mouse   309 ALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATLVVFAVLGFKANIVNEKCISQNSE 373

  Fly   380 -----------------------------------YVQKTSIDKV----------------GLEG 393
                                               .:||...::.                .::|
Mouse   374 MILKLLKMGNISWDVIPHHINLSAVTVEDYRLVYDIIQKVKEEEFAVLHLNACQIEDELNKAVQG 438

  Fly   394 PGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVL 458
            .||.||.:.||:.....|.|||::||||||.|||.|.||.:|.:||.:.|.: :|   |:|:..:
Mouse   439 TGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGSMFGTIEGIITPIVDTF-KV---RKEILTV 499

  Fly   459 LLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSK 523
            :.....|...|..:...|...|...:.|...|.:|.||.:|...|.:.||:|:|..|:..|||..
Mouse   500 ICCLLAFCIGLIFVQRSGNYFVTMFDDYSATLPLLIVVILENIAVSFVYGIDKFIEDLTDMLGFA 564

  Fly   524 PGLFWRICWTYISPVFLLTIFIFSIM-------GY----KEMLGEEYY-YPDWSYQVGWAVTCSS 576
            |..::...|.||||:.|||:.|.||:       ||    ||...||:. ||.|...|.:::...:
Mouse   565 PSKYYYYMWKYISPLMLLTLLIASIVNMGLSPPGYNAWIKEKASEEFLSYPMWGMVVCFSLMVLA 629

  Fly   577 VLCIPMYIIYK 587
            :|.:|:..|.:
Mouse   630 ILPVPVVFIIR 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 201/596 (34%)
Slc6a15NP_001239259.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..61 2/18 (11%)
SLC6sbd_SBAT1 61..640 CDD:212091 201/594 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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