DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a16

DIOPT Version :10

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_004916326.1 Gene:slc6a16 / 100497867 XenbaseID:XB-GENE-996340 Length:677 Species:Xenopus tropicalis


Alignment Length:623 Identity:214/623 - (34%)
Similarity:321/623 - (51%) Gaps:112/623 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KVTDPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFL 113
            |..:.|....|...::.::......|.|||.|.:::||.:||:|.|||||||||:|:|||||:||
 Frog     3 KSLNDLEGSTAGESQLGLLPAESVARPTWGSKVQYILAQVGFSVGLGNVWRFPYLCHQNGGGSFL 67

  Fly   114 VPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWA 178
            :.|.|.|:..|:|||::|||.||..|.|.:.:||.|.|.|.|:|:|.|::..::.:|||.||||:
 Frog    68 LLYFLLLLIIGIPLFFLELAAGQSIRQGSIGVWKHISPRLAGIGFASCVVCGFVALYYNVIIGWS 132

  Fly   179 VYYLFASFTSKLPWTSCDNPWNTENCMQVTSENFTELATSPAKE-----FFERKVL------ESY 232
            ::|||.||...|||         |||  .|..|.|:..|..||.     |:.|..|      ||.
 Frog   133 LFYLFNSFHYPLPW---------ENC--PTLPNMTQEVTECAKSSNTTYFWYRSALNVTNTIESS 186

  Fly   233 KGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGA 297
            :.|     .|:...|.|..|    ||...:.||::|:|||::.:::.|||||...|:||:.|.||
 Frog   187 EMN-----WPMTGCLCLAWF----LVCGGMIKGIKSSGKVMYFSSVFPYVVLFCFLIRGLLLEGA 242

  Fly   298 DEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCL 362
            .:||:...||:.....|.:||..||:|:||:||.|||:::|.||||...|||:.||::.|.||.:
 Frog   243 ADGIRIMFTPKLEIWGNIQVWRQAATQVFFALGLGFGSVIAYSSYNDRQNNCHFDAILVSFINFM 307

  Fly   363 TSFLAGFVIFSVLGYMA-----YVQKTSIDKV--------------------------------- 389
            ||.||..|:|:|||:.|     :...|:.:|:                                 
 Frog   308 TSILATLVVFAVLGFRANDLTRHCIDTNREKILYLISNGSLYENIVPMKNLTNSEYSQWYEITNN 372

  Fly   390 --------------------GLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGL 434
                                |:||.||.||.:.||:.....|.||||:|||||:.|||.:.||.:
 Frog   373 TLNLQQYGISDCRVEDVMNEGVEGTGLAFIAFTEAMTRFPASPFWSILFFLMLLNLGLSTMFGNM 437

  Fly   435 EAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVE 499
            :.:||.|.|.:| .:.:::.:|.::......|..|..:...|...|:..:.|...|.::.||..|
 Frog   438 QGIITPLLDNFP-YLRKKKTIFTVICCITGLLIGLIFVQRSGSYFVSMFDDYSATLPLIIVVIFE 501

  Fly   500 AAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIM--------------- 549
            ...|.|.||.:||..|:..|||.:|...::..|.|||.:.::.:.:.|::               
 Frog   502 NIAVAWVYGAERFMDDIGGMLGHRPWRIYKYIWQYISILGMIGLLLASLIRMCIEYPRYQAWNQE 566

  Fly   550 -GYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIY 586
             ..||||    .||.|:  :|...:...|..:|:.|::
 Frog   567 QAKKEML----EYPPWA--LGMLTSLIIVAALPIPIVF 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 211/598 (35%)
slc6a16XP_004916326.1 SLC5-6-like_sbd 28..599 CDD:444915 211/598 (35%)

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