DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and LOC100490052

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_002942758.1 Gene:LOC100490052 / 100490052 -ID:- Length:649 Species:Xenopus tropicalis


Alignment Length:637 Identity:257/637 - (40%)
Similarity:375/637 - (58%) Gaps:51/637 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDRSGSSDFAGAAATTGRSNPAPWSDDKESPNNEDDSNEDDGDHTTPAKVTDPLAPKLANNERIL 65
            |.|.|..:   .||:.||:        ::.|.:|..:::|..|....|::..| ||         
 Frog    22 MQRFGGDE---GAASPGRA--------QDPPGSEPGTSQDGTDAQRVAELAPP-AP--------- 65

  Fly    66 VVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYM 130
                ....|||||.|.||||:.||:.|.|||||||||:||:|||||||:||.:.|.|.|||||.|
 Frog    66 ----AGPPRETWGGKYEFLLSCIGYCVGLGNVWRFPYLCYRNGGGAFLIPYSIMLFFTGLPLFLM 126

  Fly   131 ELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSC 195
            ||:|||:...|.:::|| .||.|||:|..:.|:...:.:|||.||.|..|||..||.|.||| ||
 Frog   127 ELSLGQYGAAGPITVWK-CCPILKGIGIGMLLVSALVSLYYNVIIAWTFYYLGQSFQSPLPW-SC 189

  Fly   196 DNPWNTENCMQVTSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYF 260
            |:...::.|...|| |.::.:.:.|  |:..|||.....:||...|||...||||:...:.:::.
 Frog   190 DSALYSQLCQNGTS-NGSQFSATEA--FWNEKVLGVTHSSGLGDPGPVGWELALCLLAAWFIIFL 251

  Fly   261 SLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQI 325
            .:.||:.|:||:|:.||..||.|:::|::||.:|.|:.:|:::|||.:|.:|::::||.||||||
 Frog   252 CMLKGIHSSGKIVYFTATFPYFVMVVLIIRGATLEGSIDGVRFYLTADWKRLQSAQVWNDAASQI 316

  Fly   326 FFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVG 390
            |:|||.|||.||:::||||||||..||.|:.:..||.|||.|||.||||||:||:.:...:.:|.
 Frog   317 FYSLGIGFGGLLSMASYNKFNNNVIRDTLVIAIGNCSTSFFAGFAIFSVLGHMAWKKGVPVGQVA 381

  Fly   391 LEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRREL 455
            ..||||.|:.||||:|.:.|||||||:|||||.|||:|:.||.:|.:.||:.||.|.:...:|:.
 Frog   382 DSGPGLAFVAYPEALALLPGSVFWSILFFLMLFTLGVDTLFGNMEGITTAILDEIPSLRDWKRKT 446

  Fly   456 FVLLLLAFIF-LCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQM 519
            ..|..|.|.| |..|..:|.||:.....::.|.....::.:......|:.:||||::|..|:..|
 Frog   447 IFLGCLCFAFYLLGLLLITQGGIYWFTLIDSYSTSFGLIIIALFMCLGIAFFYGVNQFCQDILDM 511

  Fly   520 LGSKP----GLFW--RICWTYISPVFLLTI--FIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSS 576
            :...|    .:.|  :.||.:|:|:.||.|  :||..|....:....|.||.|...:|   .|..
 Frog   512 VSQCPPWCTKVLWYFKACWVFITPLLLLFILFYIFLEMYNTPLRYGAYVYPRWGQALG---ICMG 573

  Fly   577 VLC---IPMYIIYKFFFASKGGCRQRLQESFQPED---NCGSVVPGQQGTSV 622
            .||   ||::.... .....|..::|.::|.:|.:   |..|  |.:.|.::
 Frog   574 TLCCIQIPIWATVA-VLKETGTLKERFKKSLRPLNTWRNANS--PQEHGNAI 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 237/544 (44%)
LOC100490052XP_002942758.1 SLC5-6-like_sbd 70..610 CDD:382020 238/548 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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