DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a7

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_002940131.3 Gene:slc6a7 / 100487063 XenbaseID:XB-GENE-479449 Length:634 Species:Xenopus tropicalis


Alignment Length:620 Identity:247/620 - (39%)
Similarity:358/620 - (57%) Gaps:45/620 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SPNNEDDSNEDDGDHTTPAKVTDPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDL 94
            ||::.||:..|         :..|                  ..|..|..|.:|||:.||:.|.|
 Frog    20 SPSDRDDTELD---------IEYP------------------EDRGNWSGKLDFLLSCIGYCVGL 57

  Fly    95 GNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYA 159
            ||||||||..|.|||||||:||.:.|...|:|||:|||:||||...|.|::|| |.|..||||..
 Frog    58 GNVWRFPYRAYTNGGGAFLIPYFIMLAICGIPLFFMELSLGQFSSLGPLAVWK-ISPLFKGVGMG 121

  Fly   160 ICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQ---VTSENFTEL-----A 216
            :.||...:.:|||.||.:.::|||||.||.|||..|.|.|||:.|:.   :.:.|...|     .
 Frog   122 MLLIVALVAIYYNMIIAYVLFYLFASLTSSLPWEHCGNWWNTDLCLDHHVIRASNSALLVNISNT 186

  Fly   217 TSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPY 281
            .||::|::.|.||.....:|:...|.::..|.||:...:.:||..:.|||:|:||||:.||..||
 Frog   187 VSPSEEYWSRYVLHIQGSSGIGDPGQLRWKLCLCLLLSWTIVYLCILKGVKSSGKVVYFTATFPY 251

  Fly   282 VVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFN 346
            ::|::||:|||:|.||..|||:||||::..|..|||||:||.|||:|||.|||.||..:|||.|:
 Frog   252 IILVMLLIRGVTLEGAWIGIKFYLTPQFEHLLTSKVWIEAALQIFYSLGVGFGGLLTFASYNTFH 316

  Fly   347 NNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAIATMSGS 411
            .|.|||..|.:..|..||.||||.||||||||:......:|:|...||||.|:|||:|:..:..|
 Frog   317 QNIYRDTFIVTLGNAFTSILAGFAIFSVLGYMSQELGVPVDQVAKAGPGLAFVVYPQAMTMLPLS 381

  Fly   412 VFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVLLLLAFIFLCALPTMTYGG 476
            .|||.:||.||:||||||.|..:|.::||:.||:|..:..::.:|..::...:||..|...|.||
 Frog   382 PFWSFLFFFMLLTLGLDSQFAFMETIVTAITDEFPYYLRPKKAVFSAIICVALFLLGLILATDGG 446

  Fly   477 VVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLL 541
            :..:..|:.|..|..:|.:|......|...||:..|..|::.|||.||||:::.||.::|||.|:
 Frog   447 MYWLVLLDDYSAGFGLLVIVITFCLSVSRVYGIKNFCRDIQMMLGFKPGLYFKACWIFLSPVTLM 511

  Fly   542 TIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQESFQP 606
            .:..:||:.|:......|.:|.||..:|..:...|.:.||:.::.. ....:|...:|::::.:|
 Frog   512 CLLAYSILKYQPSQYGSYKFPLWSEALGILMGLLSCMMIPIGMLVA-ILKEEGSLWERIRQASRP 575

  Fly   607 EDNCGSVVPGQQGTSVXHDHAQVHVNIRTSCTSIK 641
            ..:        .|.|:..:...::||......|.|
 Frog   576 AMD--------WGPSMEENRTGMYVNTLAGSQSPK 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 234/540 (43%)
slc6a7XP_002940131.3 SLC5-6-like_sbd 37..581 CDD:382020 235/553 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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