DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a15

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_002931668.1 Gene:slc6a15 / 100380162 XenbaseID:XB-GENE-975885 Length:730 Species:Xenopus tropicalis


Alignment Length:729 Identity:234/729 - (32%)
Similarity:358/729 - (49%) Gaps:141/729 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SNEDDGDHTTPAKVTDPLAPKLANNER-ILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRF 100
            ||||.||.:  .|.::.:.....:.:| |...|..:..|..|..|.:::||.:||:|.|||||||
 Frog    25 SNEDSGDES--FKKSELVVSDDVDKDRDIEEGSDIDDERPAWNSKLQYILAQVGFSVGLGNVWRF 87

  Fly   101 PYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDI 165
            ||:|.:|||||:||||.:.|:..|:|:|::||::||..|.|.:.:|..|.|.:.|:|:|.|::.:
 Frog    88 PYLCQKNGGGAYLVPYLILLLLIGIPVFFLELSVGQRIRRGSIGVWNYISPKMGGIGFASCIVCL 152

  Fly   166 YMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQVTSENFTE---LATSPAKEFFERK 227
            ::.:|||.||||:::|...||...|||..|....|..|       .|.|   ..:|....::.|:
 Frog   153 FVALYYNVIIGWSLFYFSQSFQHPLPWDQCPLVKNASN-------TFVEPECEKSSATTYYWYRE 210

  Fly   228 VL----ESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILL 288
            .|    ...:|.||::      .:.||:...::||..::.||::|:|||::.::|.|||||...|
 Frog   211 ALNISNSITEGGGLNW------KMTLCLLAAWILVCLAMIKGIQSSGKVMYFSSLFPYVVLTCFL 269

  Fly   289 VRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDA 353
            ||.:.|.|:.:||::..||:...:...|||.:||:|:||:||.|||.::|.|||||.:|||:.||
 Frog   270 VRALLLNGSVDGIRHMFTPKLEIMLEPKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDA 334

  Fly   354 LITSSINCLTSFLAGFVIFSVLGYMA--------------------------------------- 379
            ::.|.||..||.||..|:|:|||:.|                                       
 Frog   335 VLVSFINFFTSVLATLVVFAVLGFKANIMNENCISKNTVKIVKYLEAGNLSWSNVPHHVNFSSMS 399

  Fly   380 ------------YVQKTSIDKVGL-------------EGPGLVFIVYPEAIATMSGSVFWSIIFF 419
                        .:::...|.:||             :|.||.||.:.||:.....|.|||::||
 Frog   400 AQDYNLVYYIFQKIKEEEFDSLGLDSCQIEDELNKSVQGTGLAFIAFTEAMTHFPASPFWSVMFF 464

  Fly   420 LMLITLGLDSTFGGLEAMITALCDEY-----PRVIGRRRELFVLLLLAFIFLCALPTMTYGGVVL 479
            |||:.|||.|.||.:|.:||.:.|.:     |..:|       ..||||..  .|..:...|...
 Frog   465 LMLVNLGLGSMFGTIEGIITPIVDTFKVRKEPLTVG-------CCLLAFCI--GLLFVQRSGNYF 520

  Fly   480 VNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIF 544
            |...:.|...|.:|.||.:|...:.|.||:|:|..|::.|||..|..::...|.||||| ||||.
 Frog   521 VTMFDDYSATLPLLIVVILENVAIAWVYGIDKFMDDLKDMLGFTPYKYYYYMWKYISPV-LLTIL 584

  Fly   545 I--------FSIMGYKEMLGEE-----YYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGC 596
            :        ||..||...:.|:     ..||.|...|..::...::|.:|:..|.:       .|
 Frog   585 LMASIVQMGFSPPGYYAWIAEKASEERISYPPWGLAVCISLIVFALLPVPVVFIVR-------TC 642

  Fly   597 RQRLQESFQPEDNCGSV--VPGQQG-----TSVXHDHAQ-VHVNIRTSCTS----IKIYNLNCSS 649
            .       ..:|:.||:  |..::|     ||. .|.|. :|..|::...|    ..||.....|
 Frog   643 N-------LIDDSTGSLASVSYKRGKMIKETSNLEDDASLIHEKIQSEMPSPNIGSSIYRKQSGS 700

  Fly   650 NSNSLSPTTSGAEG 663
            .:..:....:|..|
 Frog   701 PTLKVDTAPNGRYG 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 207/621 (33%)
slc6a15XP_002931668.1 SLC5-6-like_sbd 61..640 CDD:382020 206/601 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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