DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a11b

DIOPT Version :10

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_073772263.1 Gene:slc6a11b / 100150472 ZFINID:ZDB-GENE-121116-2 Length:617 Species:Danio rerio


Alignment Length:572 Identity:253/572 - (44%)
Similarity:371/572 - (64%) Gaps:22/572 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KVTDPLAPKLAN------NERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQN 107
            |..:.:.|:.||      |::.:|     ..|..|..|.||:|:|.|..:.|||||||||:||:|
Zfish    13 KAEESMDPESANPSVVRSNDKKVV-----NERGQWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKN 72

  Fly   108 GGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYN 172
            |||||.|||.:|.:..|:|:|::|.|||||...|.::.|:::||..:|:|||..:|:.::.:||.
Zfish    73 GGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYV 137

  Fly   173 TIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQVTSE---NFTE-LATSPAKEFFERKVLESYK 233
            .|:.||::|||..||::|||.||.:.||||||:...:|   |||. .:|||..||:||:||:.  
Zfish   138 VILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANFTNPYSTSPVMEFWERRVLKI-- 200

  Fly   234 GNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGAD 298
            .:|::.:|.::..||||:...:|:.||.:|||.:|.||||:|||..||.:|:|||:||::||||.
Zfish   201 SSGIEEVGGLRWELALCLAIAWVICYFCIWKGPKSTGKVVYVTATFPYFMLLILLLRGITLPGAA 265

  Fly   299 EGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLT 363
            .|||:||.|:..:|.:.:||:||.:|||||.....|.|.||.|||.:|||||||.|:...:|..|
Zfish   266 NGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNSYNNNCYRDCLMLCCLNSGT 330

  Fly   364 SFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLD 428
            ||:|||.||||||:|||.|...|:.|...||||.||.||:|:..|..:..|:.:||:|||.||||
Zfish   331 SFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLAFIAYPKAVTMMPWAPLWAALFFMMLIFLGLD 395

  Fly   429 STFGGLEAMITALCDEYPRV--IGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVY-GPGL 490
            |.|..:|:::||:.|.||:.  :|.||||.:|.:....|...|..:|.||:.:....:.| ..|:
Zfish   396 SQFVCVESLVTAIVDMYPKTFRVGYRRELLILGMSIASFFLGLIMLTEGGMYVFQLFDSYAASGM 460

  Fly   491 AILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEM- 554
            .:|||...|:..:.|.||.|||..::|.|:|.||..|.:.||.:.:|.....||:|.::.||.: 
Zfish   461 CLLFVAIFESICIGWVYGSDRFYMNIEDMIGYKPIFFIKWCWKFFTPGICTGIFLFFLIKYKPLK 525

  Fly   555 LGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQESFQP 606
            ....|.||||.|.:||.:..||::|||:.|::: .:.:||..|:|:::...|
Zfish   526 YNNVYTYPDWGYGIGWMMAMSSMVCIPLGILFQ-IWKTKGTFRERIKKLTTP 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 247/541 (46%)
slc6a11bXP_073772263.1 None

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