DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and si:ch211-117c9.5

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:XP_001922963.4 Gene:si:ch211-117c9.5 / 100150452 ZFINID:ZDB-GENE-110408-2 Length:652 Species:Danio rerio


Alignment Length:637 Identity:265/637 - (41%)
Similarity:369/637 - (57%) Gaps:81/637 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EDDSNED-----------DGDHTTPAKVT---------DPLAPKLANNERILVVSVTERTRETWG 78
            ||:|.||           :|.:|..|:.:         ||.| :|.:::           |:||.
Zfish    15 EDESQEDAEVARPLVSETEGSNTDVAEPSVCAGLVDTGDPTA-ELGHSD-----------RQTWS 67

  Fly    79 QKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCL 143
            ::.:|:::.:||||.|||||||||:||:||||.||:||.|.:.|||:|:|::|:|||||.:.|.:
Zfish    68 RQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYILMVFFGGIPVFFLEIALGQFMKQGGV 132

  Fly   144 SIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQVT 208
            :.| .|.|..||:|.|..:|..:...||..::.|.:|:|..||||.|||.:|.:.|||.||    
Zfish   133 ATW-NIAPLFKGLGLASMVIVFFCNTYYIMVLVWGLYFLAHSFTSSLPWATCGHEWNTINC---- 192

  Fly   209 SENFTELA-------------------------TSPAKEFFERKVLESYKGNGLDFMGPVKPTLA 248
            :.||:.:.                         .|...||:|||||.  ...|||.:|.:...:.
Zfish   193 TTNFSRVCFNQSPSHPNNSSLNISAGCLEPTGLRSSVMEFWERKVLR--LSGGLDEVGDISGHMV 255

  Fly   249 LCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLK 313
            ||:...:::|||.:||||:||||||:.||:.||:||::|.|.|||||||..||.|||.|.|.||.
Zfish   256 LCLLATWIIVYFCIWKGVKSAGKVVYFTAVFPYLVLVVLFVHGVSLPGAINGIIYYLKPNWSKLS 320

  Fly   314 NSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYM 378
            .::||||||:|||||...|.|.|.||.|||:||||||:||.|.:.||..|||.||||:|||||:|
Zfish   321 EAQVWIDAATQIFFSYAIGLGALTALGSYNRFNNNCYQDAFILALINSGTSFFAGFVVFSVLGFM 385

  Fly   379 AYVQKTSIDKVGLEGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCD 443
            |..|...|..|...||||.||.||:|::.|..:..|:::|||||:.|||||.|.|:|..||.:.|
Zfish   386 AAEQDVDISNVAESGPGLAFIAYPKAVSLMPLAPLWAVLFFLMLLVLGLDSQFVGVEGFITGIMD 450

  Fly   444 EYP--RVIGR-RRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVY-GPGLAILFVVFVEAAGVF 504
            ..|  ..||. |||:.|.:.....|...|..:|.||:.:....:.| ..|:.:|:..|.|...|.
Zfish   451 MLPPKSFIGSLRREVVVAICCFTCFTIDLSMVTEGGMYVFQLFDYYSASGITLLWQAFWECVVVA 515

  Fly   505 WFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEML-GEEYYYPDWSYQV 568
            |.||.|||..||..|:|.:|..:.:.||:||:||..:.:|:|.::.||.:: ...|.||.|...:
Zfish   516 WVYGADRFMDDVACMIGYRPLPYMKWCWSYITPVVCMGVFLFHVVNYKRLVYNAVYVYPWWGEAL 580

  Fly   569 GWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQE-----------SFQPEDN 609
            ||.:..||:||||:.::||.... ||...:|.|.           .|.|.:|
Zfish   581 GWFLALSSMLCIPLTVLYKLLHC-KGSLMERWQHLTTPIWGRHHLEFLPPEN 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 251/573 (44%)
si:ch211-117c9.5XP_001922963.4 SLC5-6-like_sbd 63..652 CDD:294310 253/577 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53371
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.830

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