DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn8 and PSMD7

DIOPT Version :9

Sequence 1:NP_001261167.1 Gene:Rpn8 / 37894 FlyBaseID:FBgn0002787 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_002802.2 Gene:PSMD7 / 5713 HGNCID:9565 Length:324 Species:Homo sapiens


Alignment Length:342 Identity:256/342 - (74%)
Similarity:297/342 - (86%) Gaps:18/342 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDD 65
            ||  |::|.||:|||||||||||||||:||:||||||||||||.|:.| ||||||||||||||||
Human     1 MP--ELAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDD 62

  Fly    66 KDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAK 130
            ||.|||||||||||||||||||||||||:|||||||||||:||||||||::||||||||||||.|
Human    63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVK 127

  Fly   131 PKDLGLPTEAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKIT 195
            |||||||||||||||||||||:|||||||||.||||||||||||||||||||||||||:|||:||
Human   128 PKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRIT 192

  Fly   196 NQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQM 260
            ||:.||||||::|.||:.||::|...|:||||||:|||||:||||||::..:|....|:||||||
Human   193 NQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQM 257

  Fly   261 LVVYLASMVRSIIALHNLINNKLANRDAEEGKSDSKEAKEKNKDSKDKDNKETKDKDGKKAEEKA 325
            :||||||::||::|||||||||:||||||:     ||.:||.:..||:  ||.|:||  |.:||:
Human   258 VVVYLASLIRSVVALHNLINNKIANRDAEK-----KEGQEKEESKKDR--KEDKEKD--KDKEKS 313

  Fly   326 DKGKDEGGKGSRKXERK 342
            |..|:|      |.|:|
Human   314 DVKKEE------KKEKK 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn8NP_001261167.1 PLN03246 7..308 CDD:215645 238/300 (79%)
MPN_RPN7_8 9..290 CDD:163693 231/280 (83%)
PSMD7NP_002802.2 MPN_RPN7_8 7..285 CDD:163693 229/278 (82%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..324 25/57 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147334
Domainoid 1 1.000 218 1.000 Domainoid score I2668
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2104
Inparanoid 1 1.050 515 1.000 Inparanoid score I1309
Isobase 1 0.950 - 0 Normalized mean entropy S277
OMA 1 1.010 - - QHG53821
OrthoDB 1 1.010 - - D1275837at2759
OrthoFinder 1 1.000 - - FOG0003980
OrthoInspector 1 1.000 - - oto89120
orthoMCL 1 0.900 - - OOG6_102054
Panther 1 1.100 - - LDO PTHR10540
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1207
SonicParanoid 1 1.000 - - X2737
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1615.790

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