Protein Alignment Rpn8 and eif3f

DIOPT Version :10

• Sequence 1: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_001186938.1
• Gene: eif3f / 557270
• ZFINID: ZDB-GENE-100215-2
• Length: 273
• Species: Danio rerio
• Alignment Length: 276
• Identity: 81/276 - (29%)
• Similarity: 140/276 - (50%)
• Gaps: 16/276 - (5%)

  Fly    11 VIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDH 75
            |.:||:||.|:||.:.|..:  ...||:|.|||. ..|..:||:|.|:||.:|.:.:.:|   |.
Zfish     8 VKIHPVVLASIVDSYERRNE--GASRVIGTLLGT-ADKHSVDVTNCFSVPHNESEDEVAV---DM 66

  Fly    76 DYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEA 140
            ::.:|||.:.|||:..|.:||||.||..:.::.:.|:|...|..||.:.:.:|...:...:...|
Zfish    67 EFAKNMYELHKKVSPSEVIVGWYATGFDITEHSVLIHEYYSREAPNPIHLTVDTALQSNKMNIRA 131

  Fly   141 YISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITN--QLMGLKG 203
            |:| .::...|......|..:..:....:.|.:||:.|.|  ...:.|..:...|:  |:.|..|
Zfish   132 YVS-SQMGVPGKTVGVMFTPLSVKYIYYDTERIGVDLLQR--TRASPGRTNGLTTDLAQVAGAAG 193

  Fly   204 -LNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLAS 267
             :...|..:..|::.|...|:..::.:...|.|:.|.:|.|..:.|...:....||.::|.|||:
Zfish   194 RVQEMLATVLSYIEDVLSGKVMADNSVGRFLMDLVNKVPKIPAEDFENMLNSNINDLLMVTYLAN 258

  Fly   268 MVRSIIALHNLINNKL 283
            :.::.|||    |.||
Zfish   259 LTQAQIAL----NEKL 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn8	NP_001261167.1	MPN_RPN7_8	9..290	CDD:163693	81/276 (29%)
eif3f	NP_001186938.1	MPN_eIF3f	8..270	CDD:163695	79/274 (29%)