Protein Alignment Rpn8 and cops5

DIOPT Version :9

• Sequence 1: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_989109.1
• Gene: cops5 / 394714
• XenbaseID: XB-GENE-952827
• Length: 334
• Species: Xenopus tropicalis
• Alignment Length: 318
• Identity: 69/318 - (21%)
• Similarity: 119/318 - (37%)
• Gaps: 88/318 - (27%)

  Fly    13 VHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDY 77
            |..|.||.:|.|    .:.|....|:|::||....:.:: :.:|||:|.:..:...:.....::|
 Frog    57 VSALALLKMVMH----ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEY 116

  Fly    78 LENMYGMFKKVNARERVVGWYHTGPK----LHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPT 138
            :.......|:|...|..:||||:.|.    |...|::...|.:::....|.|:||        ||
 Frog   117 MAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID--------PT 173

  Fly   139 EAYISVEEVH--------------DDGSPTSKTFEHVPSE---IGAEEAEEVGVEHLLRDIKDTT 186
            .. ||..:|:              |:|          |||   |...:.|:.||........:.|
 Frog   174 RT-ISAGKVNLGAFRTYPKGYKPPDEG----------PSEYQTIPLNKIEDFGVHCKQYYALEVT 227

  Fly   187 V--GSLSQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDI------ 243
            .  .||.:|:...|..           |.::..:..|.:..|..  |....:|:|...:
 Frog   228 YFKSSLDRKLLELLWN-----------KYWVNTLSSSSLLTNAD--YTTGQVFDLSEKLEQSEAQ 279

  Fly   244 -----------TNDQFTGTMYVKTNDQMLVVYLASMVRSIIALHNL----INNKLANR 286
                       |:|:       |:.|::......|...:|.|:|.|    |.:||.|:
 Frog   280 LGRGSFMLGLETHDR-------KSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn8	NP_001261167.1	PLN03246	7..308	CDD:215645	69/318 (22%)
		MPN_RPN7_8	9..290	CDD:163693	69/318 (22%)
cops5	NP_989109.1	MPN_RPN11_CSN5	44..314	CDD:163700	62/300 (21%)
		JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182	138..151		3/12 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910