DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn8 and psmd7

DIOPT Version :10

Sequence 1:NP_001261167.1 Gene:Rpn8 / 37894 FlyBaseID:FBgn0002787 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_956083.1 Gene:psmd7 / 327330 ZFINID:ZDB-GENE-030131-5541 Length:327 Species:Danio rerio


Alignment Length:329 Identity:249/329 - (75%)
Similarity:291/329 - (88%) Gaps:5/329 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDD 65
            ||  :::|.:|:|||||||||||||||:||:|:||||||||||.|:.| ||||||||||||||||
Zfish     1 MP--DLAVERVVVHPLVLLSVVDHFNRIGKVGSQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDD 62

  Fly    66 KDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAK 130
            ||.|||||||||||||||||||||||||:|||||||||||:||||||||:::||.||||||||.|
Zfish    63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKQYCSNSVLVIIDVK 127

  Fly   131 PKDLGLPTEAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKIT 195
            |||||||||||||||||||||:|||||||||.||||||||||||||||||||||||||:|||:||
Zfish   128 PKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRIT 192

  Fly   196 NQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQM 260
            ||:.||||||::|.|||.||::|...|:||||||:|||||:||||||:...:|....|:||||||
Zfish   193 NQVHGLKGLNSKLLDIKSYLEKVATGKLPINHQIIYQLQDVFNLLPDVNLQEFVKAFYLKTNDQM 257

  Fly   261 LVVYLASMVRSIIALHNLINNKLANRDAEEGKSDSK-EAKEKNKDSKDKDNKETKDKDGK-KAEE 323
            |||||||::||::|||||||||:||||||:.:...| ::|::.||.||||..:.|:||.. |.|:
Zfish   258 LVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKDDSKKEKKDEKDKDKDKDKEKDASAKKED 322

  Fly   324 KADK 327
            |.||
Zfish   323 KKDK 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn8NP_001261167.1 MPN_RPN7_8 9..290 CDD:163693 229/280 (82%)
psmd7NP_956083.1 MPN_RPN7_8 7..287 CDD:163693 229/280 (82%)

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