Protein Alignment Rpn8 and Brcc3

DIOPT Version :9

• Sequence 1: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_001120772.1
• Gene: Brcc3 / 316794
• RGDID: 1588543
• Length: 291
• Species: Rattus norvegicus
• Alignment Length: 168
• Identity: 36/168 - (21%)
• Similarity: 58/168 - (34%)
• Gaps: 32/168 - (19%)

  Fly    93 RVVGWYHTGPKL----HQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPT--EAYISVEEVHDDG 151
            |||||||:.|.:    ...|:....:.:......|.:|.....:|....|  ..|...:.|....
  Rat   116 RVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQK 180

  Fly   152 SPTSKTFE-------HV-------------PSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITN 196
            |...:..|       ||             |..:..||.:.....|.|..:...|      ||.|
  Rat   181 SSDYERIEIPVHVVPHVTIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVT------KIHN 239

  Fly   197 QLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQ 234
            ..:..|.|.:|:..:...|.:..:.::..|.|.:.:||
  Rat   240 GSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQ 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn8	NP_001261167.1	PLN03246	7..308	CDD:215645	36/168 (21%)
		MPN_RPN7_8	9..290	CDD:163693	36/168 (21%)
Brcc3	NP_001120772.1	MPN_BRCC36	13..270	CDD:163699	32/159 (20%)
		JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182	122..135		2/12 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900