Protein Alignment Rpn8 and Cops6

DIOPT Version :9

• Sequence 1: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_001100599.1
• Gene: Cops6 / 304343
• RGDID: 1309919
• Length: 344
• Species: Rattus norvegicus
• Alignment Length: 284
• Identity: 75/284 - (26%)
• Similarity: 145/284 - (51%)
• Gaps: 17/284 - (5%)

  Fly    11 VIVHPLVLLSVVDHFNRM-GKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLD 74
            |.:||||:|::.||:.|| .:.|...:|:|.|:|....:.: :|.|||.:.  ....:|.: .:|
  Rat    58 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNI-EVMNSFELL--SHTVEKKI-IID 118

  Fly    75 HDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTE 139
            .:|.......||:|......:|||.||.....:||.:::.|.....:.:.:.::...|...||..
  Rat   119 KEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVS 183

  Fly   140 AYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGS-----LSQKITNQLM 199
            .:.||.:: .:|..| ..|..:...:..||||.:||:|:.|   .|..||     :::.:..|..
  Rat   184 VFESVIDI-INGEAT-MLFAELTYTLATEEAERIGVDHVAR---MTATGSGENSTVAEHLIAQHS 243

  Fly   200 GLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVY 264
            .:|.|:::::.|.:|::.....::|.||:|:.:...:.:.||.::.|:|....|.:.||..|:.|
  Rat   244 AIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAY 308

  Fly   265 LASMVRSIIALHNLIN--NKLANR 286
            |.::.::...::..:|  |.|.:|
  Rat   309 LGTITKTCNTMNQFVNKFNVLYDR 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn8	NP_001261167.1	PLN03246	7..308	CDD:215645	75/284 (26%)
		MPN_RPN7_8	9..290	CDD:163693	75/284 (26%)
Cops6	NP_001100599.1	MPN_CSN6	56..338	CDD:163694	75/284 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810