Protein Alignment Rpn8 and Mysm1

DIOPT Version :10

• Sequence 1: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_001415855.1
• Gene: Mysm1 / 298247
• RGDID: 1311787
• Length: 811
• Species: Rattus norvegicus
• Alignment Length: 223
• Identity: 44/223 - (19%)
• Similarity: 82/223 - (36%)
• Gaps: 64/223 - (28%)

  Fly    94 VVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDG---SPTS 155
            |:||||:.|              .:.||..|..||.:.|     .::|.|.......|   ||.:
  Rat   634 VIGWYHSHP--------------AFDPNPSLRDIDTQAK-----YQSYFSRGGAKFIGMIVSPYN 679

  Fly   156 KT----FEHVPSEIGAEEAEEVG---------VEHLLRDIKDTTVGSLSQKITNQLMGLKGLNAQ 207
            ::    :..:...:.:||....|         |:.:|.:.:...|...::.|
  Rat   680 RSNPLPYSQITCLVISEELSPDGTYRLPYKFEVQQMLEEPQWELVFEKTRWI------------- 731

  Fly   208 LRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSI 272
               |::|  |:..|.:|::.        ||....|:|..|.......||..::...::|.  ..:
  Rat   732 ---IEKY--RLSHSSVPMDR--------IFRRDSDLTCLQKLLECLRKTLSKVANCFIAE--EFL 781

  Fly   273 IALHNLINNKLANRDAEEGKSDSKEAKE 300
            ..:.||..:...::: |.|.::...|||
  Rat   782 TQVENLFLSNYKSKE-ENGLAEENSAKE 808

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn8	NP_001261167.1	MPN_RPN7_8	9..290	CDD:163693	39/211 (18%)
Mysm1	NP_001415855.1	None