Protein Alignment Rpn8 and tif306

DIOPT Version :10

• Sequence 1: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_596298.1
• Gene: tif306 / 2540868
• PomBaseID: SPBC4C3.07
• Length: 302
• Species: Schizosaccharomyces pombe
• Alignment Length: 315
• Identity: 88/315 - (27%)
• Similarity: 131/315 - (41%)
• Gaps: 65/315 - (20%)

  Fly     2 PSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKG-VLDVSNSFAVPFDEDD 65
            ||...|...:::.|.||.|::||..|  |..|.:||:|.|||.....| .:::.:.||||.:|..
pombe    14 PSSRSSPLNIVIEPAVLFSILDHSTR--KSENNQRVIGTLLGTRSEDGREIEIKSCFAVPHNESS 76

  Fly    66 KDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAK 130
            :...|   :.:|...||.:..|.|.||.|||||.|.|.|.    |.:.|::.      |....|:
pombe    77 EQVEV---EMEYHRAMYHLHLKANPREVVVGWYATSPDLD----AFSALIQN------LYASPAE 128

  Fly   131 PKDLGLPTEAYISVE-EVHDD-GSPTS-KTFEHVPSEIG-----AEEAEEVGVEHLLRDIKDTTV 187
            |....|.|..:..|. .|:.| .||.: ||:  |.|.:|     |:....|.....:||  |..|
pombe   129 PGTAPLGTYPHPCVHLTVNTDVSSPLAIKTY--VSSPVGITERLADSCAFVPTPFTIRD--DEAV 189

  Fly   188 GSLSQKITNQLMGLKGLNAQLRD---------------------------IKQYLQRVGDSKMPI 225
            .|          |||.:.|...|                           :..|:|.|.|...|.
pombe   190 RS----------GLKAVAAPKNDPSRLASLFTDLQQLRRSTLELLSMIERVSDYVQNVIDGSSPA 244

  Fly   226 NHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSIIALHNLIN 280
            |..:...|...|:|:|.:....|.........|.::|||||:.:|:.:.:.:.:|
pombe   245 NVAVGRYLMKCFSLIPCVEGQDFEKIFSSHLQDVLVVVYLANTLRTQVDIASRLN 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn8	NP_001261167.1	MPN_RPN7_8	9..290	CDD:163693	85/308 (28%)
tif306	NP_596298.1	MPN_eIF3f	23..298	CDD:163695	84/303 (28%)