Protein Alignment Rpn8 and csn-6

DIOPT Version :9

• Sequence 1: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_001255725.1
• Gene: csn-6 / 178289
• WormBaseID: WBGene00000818
• Length: 431
• Species: Caenorhabditis elegans
• Alignment Length: 404
• Identity: 99/404 - (24%)
• Similarity: 169/404 - (41%)
• Gaps: 75/404 - (18%)

  Fly     2 PSQEVSVNKVIVHPLVLLSVVDHFNRMGKI---GNQKRVVGVLLGCWRSKG-VLDVSNSFAVPFD 62
            ||...| :||::||||::.:.:|::|. |:   ...|:|.|.:||  |..| .::..|||.:..:
 Worm     6 PSGSCS-SKVLLHPLVIMQMSEHYSRT-KVQQGPTVKKVFGAILG--RQNGRQVEAINSFVLKME 66

  Fly    63 EDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTG----------PKLHQ--NDIAINELV 115
            .::..:.|.| ..::|......:.:|....:|:|.|..|          |.|.:  |.:..:|..
 Worm    67 TEEMAEPVTF-STEHLLQRADQYLEVFPELQVIGLYCAGEDDNLTPEEKPLLSKLTNAVRNSEKA 130

  Fly   116 RRYCP------NSVLVIIDAKPKDLGLPT---EAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAE 171
            .:...      ||:......|     ||.   ||.::.:|.|       |..|.:   :.:||:|
 Worm   131 GQIDATLFLKLNSITAGTTRK-----LPLFAFEADVTDQEKH-------KPIEWI---LVSEESE 180

  Fly   172 EVGVEHL----LRDIKD-TTVGSLSQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVY 231
            .|||.|:    .:..|| .:||....:..:..|.:  |..::..|..||::|.|..:..|.:|:.
 Worm   181 RVGVNHIAKLSTKHGKDGKSVGKKHAEAQDAAMSM--LQNRVDLIVAYLEKVQDGTLQPNFEILK 243

  Fly   232 QLQDIFNLLPDITN--DQFTGTMYVKTNDQMLVVYLASMVRSIIALHNLIN--NKLANRDAE--- 289
            :...:...|..|..  .:||.: :.|....|.|..|  |.|....|.|:.|  |||:.:.|:
 Worm   244 EANLLAQKLKTIDRYAAEFTDS-FEKEEKTMTVFSL--MPRLTTLLGNMQNVWNKLSAQRADLLA 305

  Fly   290 ----EGKSDSKEAKEKNKDSKDKDNKETKDKDGKKAEEKADKGKDEGGKGSRKXERKK------K 344
                .|||.|:.|......|:.....:..|:...:.::..|   ||..:.... .|:|      .
 Worm   306 DDGFHGKSTSRWAHPVRFKSQHLGRPQQADECLFQDDDYFD---DEDLENDMSGPRRKIHAADSP 367

  Fly   345 RKPRRKRKKQRAQD 358
            ...||:|...||.:
 Worm   368 AGSRRRRVPPRAMN 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn8	NP_001261167.1	PLN03246	7..308	CDD:215645	86/341 (25%)
		MPN_RPN7_8	9..290	CDD:163693	79/321 (25%)
csn-6	NP_001255725.1	MPN	13..269	CDD:387347	66/277 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910