Protein Alignment Rpn8 and csn-5

DIOPT Version :9

• Sequence 1: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_500841.1
• Gene: csn-5 / 177342
• WormBaseID: WBGene00000817
• Length: 368
• Species: Caenorhabditis elegans
• Alignment Length: 270
• Identity: 62/270 - (22%)
• Similarity: 114/270 - (42%)
• Gaps: 61/270 - (22%)

  Fly    10 KVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKG--VLDVSNSFAVPFDEDDKDKSVWF 72
            ::.:..:.||.:..|..|.|.:    .::|:|.|...:..  :|||   ||:|.:..:...:...
 Worm    55 QIKISAIALLKMTMHAKRGGNL----EIMGLLQGRIDANSFIILDV---FALPVEGTETRVNAQA 112

  Fly    73 LDHDYLENMYGMFKKVNARERVVGWYHTGPK----LHQNDIAINELVRRYCPNSVLVIID----- 128
            ..::|:.....|......:|:||||||:.|.    |...|::...|.:::....|.::||
 Worm   113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTM 177

  Fly   129 -AKPKDLGLPTEAYISVEEVH---DDGSPTSKTFEHVPSE---IGAEEAEEVGVE---------- 176
             |...|:|    |:.:..|.:   ||          ||||   |...:.|:.||.
 Worm   178 SAGKVDIG----AFRTYPEGYRPPDD----------VPSEYQSIPLAKIEDFGVHCKRYYSLDVS 228

  Fly   177 --------HLLRDIKDT-TVGSLSQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQ 232
                    |:|..:.:: .:.:||.  :.....::.||.|::||.|.|..| |.|:.:|.:.|..
 Worm   229 FFKSQLDAHILTSLWNSYWISTLSS--SPLFSNVEFLNNQIQDINQKLSAV-DKKLQLNDRSVDG 290

  Fly   233 LQDIFNLLPD 242
            .:.:..::.|
 Worm   291 HEALMKVVTD 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn8	NP_001261167.1	PLN03246	7..308	CDD:215645	62/270 (23%)
		MPN_RPN7_8	9..290	CDD:163693	62/270 (23%)
csn-5	NP_500841.1	MPN_RPN11_CSN5	45..292	CDD:163700	61/260 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810