DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn8 and PSMD14

DIOPT Version :10

Sequence 1:NP_001261167.1 Gene:Rpn8 / 37894 FlyBaseID:FBgn0002787 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_005796.1 Gene:PSMD14 / 10213 HGNCID:16889 Length:310 Species:Homo sapiens


Alignment Length:320 Identity:70/320 - (21%)
Similarity:118/320 - (36%) Gaps:79/320 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVW 71
            :..:|.:..|.||.::.|    |:.|....|:|::||.:.....:.|.:.||:|  :.....||.
Human    27 TAEQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTGVSVE 85

  Fly    72 FLDHDYLENMYGMFKKVNARERVVGWYHTGPK----LHQNDIAINELVRRYCPNSVLVIIDAKPK 132
            .:|..:...|..|.|:....|.||||||:.|.    |...||...:........:|.|::|    
Human    86 AVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD---- 146

  Fly   133 DLGLPTEAYISVEEVHDDGSPTSKTFEHVPSE---IGAEEAEEVGVEHLLRDIKDTTVGSLSQKI 194
                |.:   ||:     |......|..:.:.   :|.|..:..           :.:|.|::..
Human   147 ----PIQ---SVK-----GKVVIDAFRLINANMMVLGHEPRQTT-----------SNLGHLNKPS 188

  Fly   195 TNQLMGLKGLNAQLRDIK-QYLQRVGDSKMPIN-HQIVYQ----LQDIFNLLPDITNDQFTGTMY 253
            ...|  :.|||.....|. .|.:...:.||.:| |:..:.    |||.              :.:
Human   189 IQAL--IHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDY--------------SEH 237

  Fly   254 VKTNDQMLVVYLASMVRSIIALHNLINNKLANRD---------AEEGKSDSKEAKEKNKD 304
            .|.|:        |:|:.::.|....|..:...|         ...||.|.|...|::.|
Human   238 CKHNE--------SVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVD 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn8NP_001261167.1 MPN_RPN7_8 9..290 CDD:163693 64/302 (21%)
PSMD14NP_005796.1 MPN_RPN11_CSN5 21..286 CDD:163700 68/315 (22%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 113..126 3/12 (25%)

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