DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF148 and Rnf148

DIOPT Version :9

Sequence 1:NP_932351.1 Gene:RNF148 / 378925 HGNCID:22411 Length:305 Species:Homo sapiens
Sequence 2:NP_082030.1 Gene:Rnf148 / 71300 MGIID:1918550 Length:316 Species:Mus musculus


Alignment Length:304 Identity:248/304 - (81%)
Similarity:267/304 - (87%) Gaps:2/304 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSFLRITPSTHSSVSSGLLRLSIFLLLSFPDSNGKAIWTAHLNITFQVGNEITSELGESGVFGNH 65
            |:.|..|||.|.|||..|||||:|||||..||.|||||||||||||||||.|.||||||||||||
Mouse    14 MNPLGPTPSVHRSVSFWLLRLSVFLLLSLRDSKGKAIWTAHLNITFQVGNRIISELGESGVFGNH 78

Human    66 SPLERVSGVVALPEGWNQNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVAAEKGANGVIIY 130
            ||||||||.|.||||||||||.||||||||.|.|:|||||||||||||||||:||||||||||||
Mouse    79 SPLERVSGAVVLPEGWNQNACSPLTNFSRPDQTDTWLALIERGGCTFTHKINLAAEKGANGVIIY 143

Human   131 NYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLF 195
            ||.|||:||||||||||||||||||.||||||:||.||:|||||:|||||||||.|:|||:|.||
Mouse   144 NYPGTGNKVFPMSHQGTENIVAVMIGNLKGMELLHLIQQGVYVTIIIEVGRMHMPWLSHYVMSLF 208

Human   196 TFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVV 260
            ||||||:.|.:|.|.||  |||.||.|||:.|:|.||||||.|||||||::||:|||.|||:|||
Mouse   209 TFLAATVTYLFLYCAWR--PRVSNSSTRRQRQLKADVKKAIGQLQLRVLQDGDKELDPNEDSCVV 271

Human   261 CFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDILK 304
            |||.||.|||:|||||||||||.|||||||||||||||||||||
Mouse   272 CFDMYKAQDVIRILTCKHFFHKTCIDPWLLAHRTCPMCKCDILK 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF148NP_932351.1 PA_GRAIL_like 43..177 CDD:239037 117/133 (88%)
zf-RING_2 256..299 CDD:290367 37/42 (88%)
Rnf148NP_082030.1 PA_GRAIL_like 56..190 CDD:239037 117/133 (88%)
zf-RING_2 267..310 CDD:290367 37/42 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83966180
Domainoid 1 1.000 137 1.000 Domainoid score I36796
eggNOG 1 0.900 - - E1_KOG4628
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H82404
Inparanoid 1 1.050 516 1.000 Inparanoid score I11942
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG36549
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0015793
OrthoInspector 1 1.000 - - oto118111
orthoMCL 1 0.900 - - OOG6_140100
Panther 1 1.100 - - LDO PTHR22765
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1977
SonicParanoid 1 1.000 - - X12665
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1818.300

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