DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and Hrh3

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_001257495.1 Gene:Hrh3 / 85268 RGDID:620630 Length:497 Species:Rattus norvegicus


Alignment Length:688 Identity:140/688 - (20%)
Similarity:214/688 - (31%) Gaps:316/688 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PYSGMYGNQTNGTIGFETK---GPR-YSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQT 137
            |..|:.  ..:||:..|..   |.| :|.|...|:..:.|:|...||.||.:||::|..|..|:|
  Rat     5 PPDGLM--NASGTLAGEAAAAGGARGFSAAWTAVLAALMALLIVATVLGNALVMLAFVADSSLRT 67

  Fly   138 ISNYFLFSLAIADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDR 202
            .:|:||.:|||:||.:||..:||:....:.|.|..|..:|..||.:|||...:||.|:::||:||
  Rat    68 QNNFFLLNLAISDFLVGAFCIPLYVPYVLTGRWTFGRGLCKLWLVVDYLLCASSVFNIVLISYDR 132

  Fly   203 YFSVTRPLTYRAKR-TTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQ 266
            :.||||.::|||:: .|.||...:...|.::.||:.|.|.||.|:.|..::|:..||.:|. .|.
  Rat   133 FLSVTRAVSYRAQQGDTRRAVRKMALVWVLAFLLYGPAILSWEYLSGGSSIPEGHCYAEFF-YNW 196

  Fly   267 YITFGTALAAFYFPVTIMCF----LYWRIWRETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNH 327
            |.....:...|:.|...:.|    :|..|.|.|:.|                             
  Rat   197 YFLITASTLEFFTPFLSVTFFNLSIYLNIQRRTRLR----------------------------- 232

  Fly   328 ASGGLLAFAQVGGNDHDTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYT 392
                                                   :|                        
  Rat   233 ---------------------------------------LD------------------------ 234

  Fly   393 CFGSIKEWCIAWWHSGREDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSRCTSMNVMRDNYSMG 457
                                                                            |
  Rat   235 ----------------------------------------------------------------G 235

  Fly   458 GSVSGVRPPSILLSDVSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHN 522
            |..:|..||    .|..|:|.|.||                :.......|:|.....:.......
  Rat   236 GREAGPEPP----PDAQPSPPPAPP----------------SCWGCWPKGHGEAMPLHRYGVGEA 280

  Fly   523 GNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAA 587
            |.|...|..|                                                       
  Rat   281 GPGVEAGEAA------------------------------------------------------- 290

  Fly   588 NGGGGGPGAGAAASASLSMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATRRPLP----SRDSEF 648
              .|||.|.|||||                    ||:::.    :|:..|.||..    |:.|..
  Rat   291 --LGGGSGGGAAAS--------------------PTSSSG----SSSRGTERPRSLKRGSKPSAS 329

  Fly   649 SLPLGRRMSHAQHDARLLNAKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQES 713
            |..|.:||.                                    |.:::..::.:.|::|    
  Rat   330 SASLEKRMK------------------------------------MVSQSITQRFRLSRDK---- 354

  Fly   714 KAAKTLSAILLSFIITWTPYNILVLIKPLTTC-SDCIP 750
            |.||:|:.|:..|.:.|.||.:|::|:  ..| ..|||
  Rat   355 KVAKSLAIIVSIFGLCWAPYTLLMIIR--AACHGRCIP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 52/124 (42%)
7tm_1 121..>314 CDD:278431 69/197 (35%)
Hrh3NP_001257495.1 7tm_1 51..>230 CDD:278431 67/179 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..259 12/132 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..336 21/130 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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