DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and chrm1a

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_001332293.3 Gene:chrm1a / 792708 ZFINID:ZDB-GENE-090410-9 Length:442 Species:Danio rerio


Alignment Length:689 Identity:211/689 - (30%)
Similarity:291/689 - (42%) Gaps:271/689 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 FVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVTTILGYWPLG 173
            |:...||.:|:.|||:|||||:::..|:|:|||||.|||:||..:|:|||.|:....:|..|.||
Zfish     4 FITVPLSLITITGNVLVMISFRVNPLLRTVSNYFLLSLAVADVILGSISMNLYTTYILLNGWTLG 68

  Fly   174 PIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAAWGISLLLWPP 238
            .:.||.|||:||:||||||:|||.||.|||.||.||||||||||..||.:||..||.||.::|.|
Zfish    69 NLACDVWLAVDYVASNASVMNLLAISIDRYLSVMRPLTYRAKRTPKRAMIMISLAWTISFVIWAP 133

  Fly   239 WIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYWRIWRETKKRQKDLP 303
            .|..|.||.|:|||.::||.|||: :...||||||:||||.||::|..||||::|||:||.:.|.
Zfish   134 AILFWQYIVGERTVQENECSIQFL-SEPVITFGTAIAAFYLPVSVMVALYWRVYRETEKRSQKLA 197

  Fly   304 NLQAGK----KDSSKRS--NSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPRSESSPDAESVYM 362
            .|.|.:    .::|:||  :||..|..|                      ||::    |.:...:
Zfish   198 GLMASQGGRTGNASQRSCQSSSRSNEDV----------------------RPQT----DQQQQQL 236

  Fly   363 TNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWWHSGREDSDDFAYEQEEPSDLGY 427
            .|                  ....:..|:|      ....|.|...|        |:|:.|: .|
Zfish   237 RN------------------EPRPVCPSFT------HRTAACWKKQR--------EREDISN-SY 268

  Fly   428 ATPVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPSILLSDVSPTPLPRPPLASISQLQEM 492
            ||                                                               
Zfish   269 AT--------------------------------------------------------------- 270

  Fly   493 SAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPVI 557
                                   ||:                                    |.:
Zfish   271 -----------------------NNH------------------------------------PQV 276

  Fly   558 NRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAASASLSMQGDCAPSIKMIHEDGP 622
            :.|:||: ..::.|     :|..|...:|||       ....|:.:.|.|.:...|:.     .|
Zfish   277 DFISSRT-DHNNKY-----IPLVGMDKSAAN-------KPHDATMNNSDQSESPNSLM-----NP 323

  Fly   623 TTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQLGKAGGGAAGGGV 687
            .||.|:|.|.:|                  |:|                                
Zfish   324 ATTQASALLLNA------------------GQR-------------------------------- 338

  Fly   688 GGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTPYNILVLIKPLTTCSDCIPTE 752
                         .:|.::....:|.|||:|||||||:||:|||||||:||:.  |.|.:|:|..
Zfish   339 -------------SRKARTSSLIKEKKAARTLSAILLAFIVTWTPYNIMVLVS--TFCDNCVPER 388

  Fly   753 LWDFFYALCYINSTINPMCYALCNATFRRTYVRILTCKW 791
            ||...|.|||:|||:||:||||||..||.|:..:|.|:|
Zfish   389 LWKLGYWLCYVNSTVNPLCYALCNKHFRVTFRALLLCRW 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 73/123 (59%)
7tm_1 121..>314 CDD:278431 110/196 (56%)
chrm1aXP_001332293.3 7tm_4 7..>195 CDD:304433 110/188 (59%)
7tm_1 16..408 CDD:278431 195/656 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 345 1.000 Domainoid score I1022
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 385 1.000 Inparanoid score I1990
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 1 1.000 - - FOG0001308
OrthoInspector 1 1.000 - - otm24829
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X324
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.070

Return to query results.
Submit another query.