DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and chrm5b

DIOPT Version :10

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_068071586.2 Gene:chrm5b / 561491 ZFINID:ZDB-GENE-041001-169 Length:505 Species:Danio rerio


Alignment Length:699 Identity:224/699 - (32%)
Similarity:303/699 - (43%) Gaps:228/699 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 YSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAV 163
            |||..::.:..|:||:|.:|:.|||:||:|||::.||:|::||:|.|||.||..||..||.|:..
Zfish    22 YSLLEVITIATVSAIVSLITIVGNVLVMLSFKVNSQLKTVNNYYLLSLAFADLIIGVFSMNLYTC 86

  Fly   164 TTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAA 228
            ..::|||.||...||.||||||:||||||:|||:||||||||:|||||||||||..||.:|||.|
Zfish    87 YILMGYWSLGNTACDLWLALDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTPKRAGIMIGMA 151

  Fly   229 WGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYWRIWR 293
            |.||.:||.|.|..|.|..|:|.||.|:|.|||. :...||||||:||||.||:||..||.:|::
Zfish   152 WLISFILWAPPILCWQYFVGERKVPLDQCQIQFF-SEPIITFGTAIAAFYVPVSIMTILYCKIYK 215

  Fly   294 ETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPRSESSPDAE 358
            ||:||.|:|..||                                                    
Zfish   216 ETEKRTKNLAELQ---------------------------------------------------- 228

  Fly   359 SVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWWHSGREDSDDFAYEQEEPS 423
                       ||..:.|:... |....|.:.:: |.:.::...|.|.|               |
Zfish   229 -----------GYPSLDSQDGP-KVRKPILRCFS-FKNKRDGTQASWSS---------------S 265

  Fly   424 DLGYATPVTIET-PLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPSILLSDVSPTPLPRPPLASIS 487
            :..|.|..|::: .|.:...:.|::|....:.....|||...|.....:.       .||::...
Zfish   266 NQSYVTRTTLQSDDLWTKSEQVTTLNSYTSSEDDDRSVSESTPRESFKNQ-------EPPVSKNG 323

  Fly   488 QLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSR 552
            ||                                                        ..:.||:
Zfish   324 QL--------------------------------------------------------VCYEDSK 332

  Fly   553 TLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAASASLSMQGDCAPSIKMI 617
            .|                        ||.|..:..|.           ...||.:      .|.|
Zfish   333 YL------------------------SDVAKCSQTNN-----------KKCLSYK------FKPI 356

  Fly   618 HEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQLGKAGGGA 682
            ..|       ...|...:.:.|..|.:.|:...|.....|....|.   |.|:            
Zfish   357 ISD-------ITVLQGNSESERANPDQSSDQQAPSSTSSSTKPEDP---NLKI------------ 399

  Fly   683 AGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTPYNILVLIKPLTTCSD 747
                             ...|:|.....:|.|||:|||||||:|::|||||||:|||.  |.||:
Zfish   400 -----------------QMTKRKRMVLIKEKKAAQTLSAILLAFLLTWTPYNIMVLIS--TFCSN 445

  Fly   748 CIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRILTCKWHTRNR 796
            ||||.||...|.|||:|||:|||||||||.||::|:..::.||| .:||
Zfish   446 CIPTSLWQLGYWLCYVNSTVNPMCYALCNKTFQKTFWMLILCKW-KKNR 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 115/194 (59%)
TM helix 1 106..132 CDD:320428 13/25 (52%)
TM helix 2 139..165 CDD:320428 13/25 (52%)
TM helix 3 177..207 CDD:320428 25/29 (86%)
TM helix 4 219..242 CDD:320428 13/22 (59%)
TM helix 5 265..294 CDD:320428 17/28 (61%)
7tm_GPCRs <707..783 CDD:475119 49/75 (65%)
TM helix 6 716..738 CDD:410628 16/21 (76%)
TM helix 7 751..776 CDD:410628 17/24 (71%)
chrm5bXP_068071586.2 None

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