DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and chrm5a

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_001018639.1 Gene:chrm5a / 553978 ZFINID:ZDB-GENE-080723-32 Length:490 Species:Danio rerio


Alignment Length:715 Identity:222/715 - (31%)
Similarity:304/715 - (42%) Gaps:277/715 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 YSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAV 163
            :||..::.:..|:||:|.:|:.||::||:|||::.||:|::||:|.|||.||..||..||.|:..
Zfish    20 HSLWEVIAIATVSAIVSFITIIGNILVMLSFKVNSQLKTVNNYYLLSLAFADLIIGVFSMNLYTS 84

  Fly   164 TTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAA 228
            ..::|||.||.:.||.||||||:||||||:|||:||||||||:|||||||||||...|.:|||.|
Zfish    85 YILMGYWALGSLACDLWLALDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTPKIAGIMIGLA 149

  Fly   229 WGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYWRIWR 293
            |.:|.:||.|.|..|.|..||||||:.:|.|||. :...||||||:|||||||::|..||..|::
Zfish   150 WLVSFILWAPPILCWQYFVGKRTVPERQCQIQFF-SEPVITFGTAIAAFYFPVSVMTILYCLIYK 213

  Fly   294 ETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPRSESSPDAE 358
            ||::|.|||..||.        .|||                               :.||.||:
Zfish   214 ETERRTKDLAELQG--------INSS-------------------------------TNSSGDAQ 239

  Fly   359 SVYMTNMVIDSGYHGMH----SRKSSIKSTN---TIKKSYTCFGSIKEWCIAWWHSGREDSD--- 413
            .     ..|.|.:...|    ||..::..||   |:....|.|.|         ::..|:.|   
Zfish   240 P-----QKIRSCFGCKHVSNTSRTQALSHTNAAKTLDDQLTNFNS---------YASSEEEDRSG 290

  Fly   414 ---DFAYEQEEPSDLGYATPVTIETPLQSS---VSRCTSMNVMRDNYSMGGSVSGVRPPSILLSD 472
               :....||..|: .|.......||:::|   ..:|.|..              .:|     .|
Zfish   291 NFQESCRHQENKSE-SYEEENFFPTPVKASPTKTKKCVSYK--------------FKP-----KD 335

  Fly   473 VSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNGSG 537
            |||                                     :.|.|                    
Zfish   336 VSP-------------------------------------LKNTN-------------------- 343

  Fly   538 IGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAASA 602
                                                                |...|||.:.:||
Zfish   344 ----------------------------------------------------GDAKPGASSFSSA 356

  Fly   603 SLSMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLN 667
            .         |:     :.|::::::.|:...                               |.
Zfish   357 E---------SV-----NAPSSSSSSKPIDGT-------------------------------LK 376

  Fly   668 AKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTP 732
            .::                               .|:|.....:|.|||:|||||||:||:||||
Zfish   377 CQI-------------------------------TKRKRMVLIKEKKAAQTLSAILLAFILTWTP 410

  Fly   733 YNILVLIKPLTTCSDCIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRILTCKWHTRNRE 797
            |||:|||.  |.||||||..||...|.|||:|||:|||||||||.||::|:..:|.|:|..:..|
Zfish   411 YNIMVLIS--TFCSDCIPLSLWHLGYWLCYVNSTVNPMCYALCNKTFQKTFRMLLLCQWRKQRAE 473

  Fly   798  797
            Zfish   474  473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 75/123 (61%)
7tm_1 121..>314 CDD:278431 112/192 (58%)
chrm5aNP_001018639.1 7tm_4 34..>167 CDD:304433 79/132 (60%)
7tm_1 42..448 CDD:278431 202/666 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 345 1.000 Domainoid score I1022
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 385 1.000 Inparanoid score I1990
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 1 1.000 - - FOG0001308
OrthoInspector 1 1.000 - - otm24829
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2382
SonicParanoid 1 1.000 - - X324
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1111.100

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