DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and Oamb

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:804 Identity:159/804 - (19%)
Similarity:248/804 - (30%) Gaps:347/804 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVT 164
            :|.|:.|:.|:    :.:.:.||.:|:.:.....:|::::|:|:.:||:||..:|...:|..|..
  Fly    20 NLISLAVLEFI----NVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATW 80

  Fly   165 TILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAAW 229
            .:...|..|.:.|..|||:|.....||:|||..||.|||.:||||:||.:..:|.:|..:|...|
  Fly    81 EVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIW 145

  Fly   230 GISLLLWPPWIYSW---------PYIEGKRTV--------------------------------- 252
            .:|..:..|.:..|         .|.:|..|:                                 
  Fly   146 VLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPH 210

  Fly   253 --------PKD----------ECYIQFIETNQYITFGT--------------------------- 272
                    |.|          |..|..|::....|..|                           
  Fly   211 IGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNR 275

  Fly   273 ------------------------ALAAFYFPVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSS 313
                                    ||.:||.|:.:|.|.||||:|...:..:.:.......|.|.
  Fly   276 PQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSK 340

  Fly   314 KRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRK 378
            ...:..:|..:......|.      |.|..|:                            ||| .
  Fly   341 GIGSRFEEQRLTLRIHRGR------GSNQQDS----------------------------MHS-N 370

  Fly   379 SSIKSTNTIKKSYTCFGSIKEWCIAWWHSGREDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSR 443
            .|.:||.|                                             |:.||....:|:
  Fly   371 GSTQSTTT---------------------------------------------TLGTPSPERLSK 390

  Fly   444 CTSMNVMRDNYSMGGSVSGVRPPSILLSDVSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGN 508
            ..:..:...:             .|.:|      :..|...:||:|.                  
  Fly   391 YATRRLHHHD-------------KIKIS------VSYPSSENISELA------------------ 418

  Fly   509 GNGAINNNNNASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTI 573
            |:|.:.:....|.|...||:.||.                            |.|..::..:|. 
  Fly   419 GHGDVGHERRQSGNALFAVHYNGT----------------------------NGRESTESQLYR- 454

  Fly   574 LIRLPSDGASSNAANGGGGGPGAGAAASASLSMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATR 638
              :....|.:|:.....|.|                                             
  Fly   455 --QQQQHGVASSCYLQVGKG--------------------------------------------- 472

  Fly   639 RPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKK 703
              ||.        |.||.|:.                .:|||   .|....|:..|..||.    
  Fly   473 --LPE--------LARRQSNT----------------SEAGG---SGHSRPANKKMGRRNI---- 504

  Fly   704 KKSQEK--RQESKAAKTLSAILLSFIITWTPYNILVLIKPLTTCSDCIPTELWDFFYALCYINST 766
             |:|.|  |.|:||||||:.|:..||..|.|:..:.:|:|.  |.||:...|:...:.|.|.||.
  Fly   505 -KAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPF--CQDCVDPLLFSVLFWLGYCNSA 566

  Fly   767 INPMCYALCNATFRRTYVRILTCK 790
            :|||.|||.:..||..:.||: |:
  Fly   567 VNPMIYALFSKDFRFAFKRII-CR 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 42/123 (34%)
7tm_1 121..>314 CDD:278431 67/303 (22%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 42/128 (33%)
7tm_1 37..>181 CDD:278431 46/143 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460632
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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