DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and 5-HT2B

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster


Alignment Length:946 Identity:200/946 - (21%)
Similarity:336/946 - (35%) Gaps:304/946 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ENLTSTAASGLYDPYSGMYGNQTNGTIG-------FETKGPRYSLASMVVMGFVAAILSTVTVAG 121
            :..|:.|.|.....:...:....|.||.       |:.......||.::|:|         |.||
  Fly    35 QRTTANATSRHNQLHVARWNATGNATISATFEDVPFDANNYWALLALVLVLG---------TAAG 90

  Fly   122 NVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYL 186
            |::|.::...:::||.::||||.||||.|..:..:.|||..:|.:.||:|||...|.||:.||.|
  Fly    91 NILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYFPLGSEHCLTWICLDVL 155

  Fly   187 ASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAAWGISLLLWPP--WIYSWPY---- 245
            ...||:::|..||.|||.|:..|:.:...:|..|..:.|...|.:|:.:..|  .:||..:    
  Fly   156 FCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLPLSLMYSKNHASVL 220

  Fly   246 IEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYWRIWRETKKRQKDL-------- 302
            :.|...:| |..|          ....::..||.|:.:|...|....|...:::::|        
  Fly   221 VNGTCQIP-DPVY----------KLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQNLGGGQQTAA 274

  Fly   303 -------------PNLQ------------AGKKDS-----SKRSNSSDENTVVNH---------- 327
                         |.|:            .|...|     |..|..:|.:|:.||          
  Fly   275 ATPGWASGWLGQAPALERRCTWRRLLKPGPGNASSVLHAHSANSTDTDLSTLDNHELWLPDSSIK 339

  Fly   328 --ASGGLLAFAQVG-------------GNDHDTWRRPRSESS---------PDAESVYMTNMVID 368
              ....:.|..|.|             .:...|....:||.|         |.:...|..... .
  Fly   340 EPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLSNHLQLQYPSSPQRYAATHQ-Q 403

  Fly   369 SGYH-------GMHSRKSSIK---STNTIKKSYTCFGSIKEW---CIAWWHSGREDSDDF----- 415
            |.:|       |::.:::|.|   .|..:..|.|..|..:|.   .:|....|.|.||..     
  Fly   404 SHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTLGIERESTRNSLASSRMGGEQSDGTLSQLS 468

  Fly   416 ----AYEQ----------------EEPSDLGYATPVTI--------ETPLQSSVSRCTSMNVMRD 452
                ||::                .|.:|....||.:.        ..|..:...|.|::....|
  Fly   469 QRLRAYKKRRRASSAVPGREKRAGHEDADEDVETPTSTLRRHKRHNSLPKNALYPRHTTVQESLD 533

  Fly   453 N-----------------YSMGGSVSGVRPPS----------------ILLSDVSPTPL--PRP- 481
            :                 ..:..|.:.:.||.                :.|..|...|.  .|| 
  Fly   534 DDDDEEEESAQQKDQQTKSKICHSDTELDPPQKAKQCHIAGQNHQSDYLQLPSVCTCPYFGDRPL 598

  Fly   482 ----PLASISQLQEMSAVTASTTANVNTS---------GNGN----------------------- 510
                ..|.:..:.....||.:||| |::|         .:||                       
  Fly   599 QNCVKSAEVKIISSAFRVTTTTTA-VSSSPSEMELLMCSSGNKKSLTSSVSAGITGGPAGAAPAT 662

  Fly   511 -GAINNNNNASHNGNG-AVNGNGAGNGSGIGLGTTGNATHRDSRTLPVI----NRINSRSVSQDS 569
             |:..:.::|.:.|:. .|..:|:|..:..|....|......|:|..|:    :|...|..|...
  Fly   663 VGSTLSPHSAHNQGSSLTVQSDGSGYLAAPGTPCPGRRKLSISKTASVVTWDSSRHRRRGSSFGG 727

  Fly   570 VYTILIRLPSDGA-SSNAANGGGGGP---GAGAAASASLSMQ--GDCAPSIKMIHEDGPTTTAAA 628
            |.|.|:..|:..| :||::.     |   .|...:..:::.|  |:|.         |.|.|..:
  Fly   728 VRTSLLLTPTKTATTSNSST-----PLRRSATLRSHQNMNYQGAGECG---------GKTRTTTS 778

  Fly   629 APLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQLGKAGGGAAGGGVGGAHAL 693
            :|..                   |.|:.:...|.:|  |:.||                      
  Fly   779 SPCM-------------------LQRQQTVRSHHSR--NSSVI---------------------- 800

  Fly   694 MNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTPYNILVLIKPLTTCSDC---IPTELWD 755
              :||::   :..:..|.|.||.|.|..:..:|:|.|:|:.:|.|:.  |.|::|   |...::|
  Fly   801 --SRNSS---RHGRIIRLEQKATKVLGVVFFTFVILWSPFFVLNLLP--TVCAECEERISHWVFD 858

  Fly   756 FFYALCYINSTINPMCYALCNATFRRTYVRILTCKW 791
            ....|.|.:|.:||:.|.:.|..||:.:.::|.|::
  Fly   859 VVTWLGYASSMVNPIFYTIFNKVFRQAFKKVLLCRY 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 47/125 (38%)
7tm_1 121..>314 CDD:278431 62/236 (26%)
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 57/182 (31%)
7tm_4 90..>238 CDD:304433 51/158 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460683
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.