DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and chrm2a

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_840086.1 Gene:chrm2a / 352938 ZFINID:ZDB-GENE-030314-1 Length:495 Species:Danio rerio


Alignment Length:719 Identity:222/719 - (30%)
Similarity:305/719 - (42%) Gaps:235/719 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 DPYSGMYGNQTNGTIGFET--KGPRYSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTI 138
            |..:..:.|.::|....||  :.| |....:|.:..||..||.|||.||::||:|.|:::.|||:
Zfish     2 DTINFTFWNASDGNETMETADESP-YKTVEVVFIVLVAGSLSLVTVIGNILVMLSIKVNRSLQTV 65

  Fly   139 SNYFLFSLAIADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRY 203
            :||||||||.||..||..||.|:.|..::|||||||:|||.||||||:.|||||:||||||||||
Zfish    66 NNYFLFSLACADLIIGLCSMNLYTVYIVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRY 130

  Fly   204 FSVTRPLTYRAKRTTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYI 268
            |.||:||:|...|||..|.:||.|||.:|.:||.|.|..|.:|.|.||||:.||||||. :|..:
Zfish   131 FCVTKPLSYPVNRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGGRTVPEKECYIQFF-SNAAV 194

  Fly   269 TFGTALAAFYFPVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLL 333
            |||||:||||.||.||..|||::.|.:|.|.         |||:.|.|                 
Zfish   195 TFGTAIAAFYLPVIIMMVLYWQVSRASKSRV---------KKDNRKPS----------------- 233

  Fly   334 AFAQVGGNDHDTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIK 398
                 |||                         :|            :.|:|.|:::        
Zfish   234 -----GGN-------------------------LD------------VASSNQIREN-------- 248

  Fly   399 EWCIAWWHSGREDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGV 463
                   .:.:..:::...|:   :|.| .|.:|.:|..|            .|.....|..   
Zfish   249 -------SANKPTNNNLTAEE---TDRG-QTQLTDDTINQ------------HDAKLQNGKA--- 287

  Fly   464 RPPSILLSDVSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVN 528
                           |........:..:.:.:.|....:.|.|.:|:||:.|...     ..|..
Zfish   288 ---------------PSTASGEAEEAGQANCIPAEEKESSNDSTSGSGAVTNQKE-----EAAPP 332

  Fly   529 GNGAGNGSGIGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGG 593
            .:.|.|               ||:|                              |.......||
Zfish   333 SSAAAN---------------DSQT------------------------------STRHRAKAGG 352

  Fly   594 PGAGAAASASLSMQGDC-APSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMS 657
            .........:.|.:||| |||...:.                              .:|...|.:
Zfish   353 SKLTCIKIITKSPKGDCYAPSNATVE------------------------------IVPAVERQN 387

  Fly   658 HAQHDARLLNAKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAI 722
            |.                              |..::.......||||:...| |.|..:|:.||
Zfish   388 HV------------------------------ARKIVKMTKQPPKKKKAPSSR-EKKVTRTIMAI 421

  Fly   723 LLSFIITWTPYNILVLIKPLTTCSDCIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRIL 787
            |::|:.||||||::|||...  ||.|||..:|...|.||||||||||.||||||.||::|:.::|
Zfish   422 LVAFVATWTPYNVMVLINAF--CSSCIPNTVWTIGYWLCYINSTINPACYALCNITFKKTFKQLL 484

  Fly   788 TCKW 791
            .|::
Zfish   485 LCQY 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 78/123 (63%)
7tm_1 121..>314 CDD:278431 112/192 (58%)
chrm2aNP_840086.1 7tm_4 40..>173 CDD:304433 82/132 (62%)
7tm_1 48..>231 CDD:278431 112/192 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24829
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X324
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.020

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