DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and Hrh1

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_017447930.1 Gene:Hrh1 / 24448 RGDID:2830 Length:542 Species:Rattus norvegicus


Alignment Length:761 Identity:161/761 - (21%)
Similarity:257/761 - (33%) Gaps:275/761 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 YPG----------TTLLTALFENLTSTAASGLYDPYSGMYGNQTNGTIGFETK---GPRYSLASM 104
            :||          ..|:...|.|.:||                      ||.|   |.|.::||.
  Rat    39 FPGAGSGREPSLEAALVPMSFANTSST----------------------FEDKMCEGNRTAMASP 81

  Fly   105 VVMGFVAAI--LSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVTTIL 167
            .::..|..:  :|.|||..|::|:.:...:::|.|:.|.::.||::||..:||:.||:..:..|:
  Rat    82 QLLPLVVVLSSISLVTVGLNLLVLYAVHSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLIM 146

  Fly   168 GYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAAWGIS 232
            ..|.||..:|..||::||:||.||:.::.|:..|||.||.:||.|...||..||:..|..||..|
  Rat   147 TKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLRYRTKTRASATILGAWFFS 211

  Fly   233 LLLWPPWIYSW-PYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYWRIWRETK 296
             .||...|..| .::.....:.:|:|...|.... :....||:..||.|..:|.:.|.:|::..:
  Rat   212 -FLWVIPILGWHHFMPPAPELREDKCETDFYNVT-WFKIMTAIINFYLPTLLMLWFYVKIYKAVR 274

  Fly   297 K--RQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPRSESSPDAES 359
            :  :.:.|.|                         |.|.:|:::.....||   ......|..||
  Rat   275 RHCQHRQLTN-------------------------GSLPSFSELKLRSDDT---KEGAKKPGRES 311

  Fly   360 VYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWWHSGREDSDDFAYEQEEPSD 424
            .:           |:..|.|...|....:||                           ..|:|. 
  Rat   312 PW-----------GVLKRPSRDPSVGLDQKS---------------------------TSEDPK- 337

  Fly   425 LGYATPVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPSILLSDVSPTPLPRPPLASISQL 489
              ..:|.......:.....|..:::|:......|.|.|        |..:...|.:|.:      
  Rat   338 --MTSPTVFSQEGERETRPCFRLDIMQKQSMAEGDVRG--------SKANDQALSQPKM------ 386

  Fly   490 QEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTL 554
                                                                        |.::|
  Rat   387 ------------------------------------------------------------DEQSL 391

  Fly   555 PVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAASASLSMQGDCAPSIKMIHE 619
            ....||:..|..|..|                             ...|.|...|...||    |
  Rat   392 NTCRRISETSEDQTLV-----------------------------DQQSFSRTTDSDTSI----E 423

  Fly   620 DGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQLGKAGGGAAG 684
            .||                              ||..|.:..::.|...|:..|:|         
  Rat   424 PGP------------------------------GRVKSRSGSNSGLDYIKITWKRL--------- 449

  Fly   685 GGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTPYNILVLIKPLTTCSDCI 749
                        |:.:::........:|.||||.|..|:.:||:.|.||.|..::  :..|..|.
  Rat   450 ------------RSHSRQYVSGLHLNRERKAAKQLGFIMAAFILCWIPYFIFFMV--IAFCKSCC 500

  Fly   750 PTELWDFFYALCYINSTINPMCYALCNATFRRTYVRILTCKWHTRN 795
            ...:..|...|.|||||:||:.|.|||..|::|:.:||    |.|:
  Rat   501 SEPVHMFTIWLGYINSTLNPLIYPLCNENFKKTFKKIL----HIRS 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 48/123 (39%)
7tm_1 121..>314 CDD:278431 60/195 (31%)
Hrh1XP_017447930.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.