DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and Hrh4

DIOPT Version :10

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_694727.1 Gene:Hrh4 / 225192 MGIID:2429635 Length:391 Species:Mus musculus


Alignment Length:290 Identity:84/290 - (28%)
Similarity:134/290 - (46%) Gaps:52/290 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 ASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVTTI 166
            |:.|.:.|:.:..:...:.||.:|:::|.:|:.|:..||||..:|||:||.:|.||:||: :..:
Mouse    13 AAQVPLAFLMSSFAFAIMVGNAVVILAFVVDRNLRHRSNYFFLNLAISDFLVGLISIPLY-IPHV 76

  Fly   167 LGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRT-TNRAAVMIGAAWG 230
            |..|..|..:|..||..|||...|||.|:::||:|||.||:..::|||:.| ..:....:.|.|.
Mouse    77 LFNWNFGSGICMFWLITDYLLCTASVYNIVLISYDRYQSVSNAVSYRAQHTGIMKIVAQMVAVWI 141

  Fly   231 ISLLLWPPWIY---SWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCF----LY 288
            ::.|:..|.|.   ||     |.:....:|...|: |..||...|.|..|..||..:.:    :|
Mouse   142 LAFLVNGPMILASDSW-----KNSTNTKDCEPGFV-TEWYILTITMLLEFLLPVISVAYFNVQIY 200

  Fly   289 WRIWRE-----------------------------TKKRQKDLPNLQAGKKDSSKRSNSSDENTV 324
            |.:|:.                             .:.....|....|.:...|.|..||...::
Mouse   201 WSLWKRRALSRCPSHAGFSTTSSSASGHLHRAGVACRTSNPGLKESAASRHSESPRRKSSILVSL 265

  Fly   325 VNHASGGLLAFAQVGGNDHDTWRRPRSESS 354
            ..|.:..:.|| :||    ..|   ||||:
Mouse   266 RTHMNSSITAF-KVG----SFW---RSESA 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 67/231 (29%)
TM helix 1 106..132 CDD:320428 5/25 (20%)
TM helix 2 139..165 CDD:320428 14/25 (56%)
TM helix 3 177..207 CDD:320428 16/29 (55%)
TM helix 4 219..242 CDD:320428 5/25 (20%)
TM helix 5 265..294 CDD:320428 10/32 (31%)
7tm_GPCRs <707..783 CDD:475119
TM helix 6 716..738 CDD:410628
TM helix 7 751..776 CDD:410628
Hrh4NP_694727.1 7tm_GPCRs 16..376 CDD:475119 83/287 (29%)
TM helix 1 18..42 CDD:410628 5/23 (22%)
TM helix 2 51..73 CDD:410628 13/22 (59%)
TM helix 3 88..110 CDD:410628 10/21 (48%)
TM helix 4 134..150 CDD:410628 3/15 (20%)
TM helix 5 174..197 CDD:410628 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..258 4/19 (21%)
TM helix 6 304..326 CDD:410628
TM helix 7 339..364 CDD:410628
Blue background indicates that the domain is not in the aligned region.

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