DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and LOC110438988

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_021328463.1 Gene:LOC110438988 / 110438988 -ID:- Length:259 Species:Danio rerio


Alignment Length:246 Identity:122/246 - (49%)
Similarity:163/246 - (66%) Gaps:9/246 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 NQTNGTIGFETKGPRYSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAI 148
            |:|:..|      |.:......::.|:...||.:|:.|||:|||||:::..|:|:|||||.|||:
Zfish     8 NETDSPI------PGFISWKTAMITFITVPLSLITITGNVLVMISFRVNPLLRTVSNYFLLSLAV 66

  Fly   149 ADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYR 213
            ||..:|:|||.|:....:|..|.||.:.||.|||:||:||||||:|||.||.|||.||.||||||
Zfish    67 ADVILGSISMNLYTTYILLNGWTLGNLACDVWLAVDYVASNASVMNLLAISIDRYLSVMRPLTYR 131

  Fly   214 AKRTTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFY 278
            ||||..||.:||..||.||.::|.|.|..|.||.|:|||.::||.|||: :...||||||:||||
Zfish   132 AKRTPKRAMIMISLAWTISFVIWAPAILFWQYIVGERTVQENECSIQFL-SEPVITFGTAIAAFY 195

  Fly   279 FPVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHAS 329
            .||::|..||||::|||:||.:.|..|.|.:  ..:..|:|.....|...|
Zfish   196 LPVSVMVALYWRVYRETEKRSQKLAGLMASQ--GGRTGNASQVGFTVKTLS 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 73/123 (59%)
7tm_1 121..>314 CDD:278431 110/192 (57%)
LOC110438988XP_021328463.1 7tm_GPCRs 23..>214 CDD:333717 109/191 (57%)
TM helix 1 25..49 CDD:320095 12/23 (52%)
TM helix 2 58..80 CDD:320095 14/21 (67%)
TM helix 3 96..118 CDD:320095 16/21 (76%)
TM helix 4 141..157 CDD:320095 7/15 (47%)
TM helix 5 183..206 CDD:320095 14/22 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.