DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and hrh4.d1

DIOPT Version :10

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_004915714.2 Gene:hrh4.d1 / 101734803 XenbaseID:XB-GENE-22168426 Length:382 Species:Xenopus tropicalis


Alignment Length:349 Identity:96/349 - (27%)
Similarity:156/349 - (44%) Gaps:79/349 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TNGTIGFETKGPRYSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIAD 150
            ||.|.|.|   ..::..:.|::..:.|:|..:.|.||.:|:::|.:||:|::.||:||.:|||.|
 Frog    17 TNETTGLE---KYFAEGTNVLLIILIALLIILIVLGNSIVILAFIVDKRLRSQSNFFLLNLAICD 78

  Fly   151 FAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRA- 214
            |.:||.|:||:......|.|.||..:|..||.||:..|.||...:::||:||:.|||:.:.||. 
 Frog    79 FLVGAFSIPLYIPFLFSGKWMLGRFLCKLWLILDFTTSAASAFGVVLISYDRFLSVTKAVLYRTQ 143

  Fly   215 KRTTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYF 279
            :|..::.|:.:..||..|.|::.|.|..|..:.|.....:..|...|.:...::...::| .|.|
 Frog   144 QRRHSQTALKMVVAWIFSFLIYGPAIIFWEILTGTYETNEYSCRAGFFDAWYFLLCASSL-DFAF 207

  Fly   280 PVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSSKRSNS---SDENTVVNHASGGLLAFAQVGGN 341
            |:..:.|...||:...|||             |.|:.||   |:|.                   
 Frog   208 PMISISFFNMRIYWNIKKR-------------SRKKRNSCQMSEEQ------------------- 240

  Fly   342 DHDTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWWH 406
                    ::|:||   .:..|::|: |...|.....||:..|                      
 Frog   241 --------KTEASP---YIIATHIVL-SCPKGKEKVDSSLNKT---------------------- 271

  Fly   407 SGREDSDDFAYEQEEPSDLGYATP 430
                 .:|||.:..|||....:.|
 Frog   272 -----VNDFAKQSFEPSSQTMSGP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 68/195 (35%)
TM helix 1 106..132 CDD:320428 7/25 (28%)
TM helix 2 139..165 CDD:320428 14/25 (56%)
TM helix 3 177..207 CDD:320428 13/29 (45%)
TM helix 4 219..242 CDD:320428 7/22 (32%)
TM helix 5 265..294 CDD:320428 7/28 (25%)
7tm_GPCRs <707..783 CDD:475119
TM helix 6 716..738 CDD:410628
TM helix 7 751..776 CDD:410628
hrh4.d1XP_004915714.2 7tmA_Histamine_H3R_H4R 47..372 CDD:320176 88/316 (28%)
TM helix 2 67..94 CDD:320176 14/26 (54%)
TM helix 3 105..135 CDD:320176 13/29 (45%)
TM helix 4 150..168 CDD:320176 5/17 (29%)
TM helix 5 193..223 CDD:320176 7/30 (23%)
TM helix 6 300..330 CDD:320176
TM helix 7 340..365 CDD:320176
Blue background indicates that the domain is not in the aligned region.

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